RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 EFCAB7A8K855 629 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 NR5A2O00482 541 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 AKAP10O43572 662 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 GALR3O60755 368 aaPredicted RBP19.54■□□□□ 0.72
SHISA4-201ENST00000362011 GUCY1B2O75343 617 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 LRATO95237 230 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 FAM58BPP0C7Q3 252 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 COX4I1P13073 169 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 PRPS1L1P21108 318 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 IL12AP29459 219 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 HPCAL1P37235 193 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 RPL3P39023 403 aaKnown RBP19.54■□□□□ 0.72
SHISA4-201ENST00000362011 POLR2JP52435 117 aaKnown RBP19.54■□□□□ 0.72
SHISA4-201ENST00000362011 KCNK10P57789 538 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 C21orf58P58505 322 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 TAS2R50P59544 299 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 SNRPNP63162 240 aaKnown RBP19.54■□□□□ 0.72
SHISA4-201ENST00000362011 FOXM1Q08050 763 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 C2orf80Q0P641 193 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 FAM53BQ14153 422 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 YOD1Q5VVQ6 348 aaPredicted RBP19.54■□□□□ 0.72
SHISA4-201ENST00000362011 CDCP2Q5VXM1 449 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 MRM1Q6IN84 353 aaKnown RBP19.54■□□□□ 0.72
SHISA4-201ENST00000362011 FAM71E1Q6IPT2 247 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 RIPOR1Q6ZS17 1223 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 SNX32Q86XE0 403 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 FUNDC1Q8IVP5 155 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 KRTCAP2Q8N6L1 136 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 RP9Q8TA86 221 aaKnown RBP19.54■□□□□ 0.72
SHISA4-201ENST00000362011 TM4SF18Q96CE8 201 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 NSL1Q96IY1 281 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 STRADBQ9C0K7 418 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 TAGLN3Q9UI15 199 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 NAALAD2Q9Y3Q0 740 aa19.54■□□□□ 0.72
SHISA4-201ENST00000362011 AGRPO00253 132 aa19.53■□□□□ 0.72
SHISA4-201ENST00000362011 SNRPB2P08579 225 aaKnown RBP19.53■□□□□ 0.72
SHISA4-201ENST00000362011 IL3P08700 152 aa19.53■□□□□ 0.72
SHISA4-201ENST00000362011 ZFP36L2P47974 494 aaKnown RBP19.53■□□□□ 0.72
SHISA4-201ENST00000362011 ARSFP54793 590 aa19.53■□□□□ 0.72
SHISA4-201ENST00000362011 KLC1Q07866 573 aa19.53■□□□□ 0.72
SHISA4-201ENST00000362011 CYLC2Q14093 348 aaPredicted RBP19.53■□□□□ 0.72
SHISA4-201ENST00000362011 BLOC1S3Q6QNY0 202 aa19.53■□□□□ 0.72
SHISA4-201ENST00000362011 PRSS41Q7RTY9 318 aa19.53■□□□□ 0.72
SHISA4-201ENST00000362011 BPHLQ86WA6 291 aaPredicted RBP19.53■□□□□ 0.72
SHISA4-201ENST00000362011 RIMKLAQ8IXN7 391 aa19.53■□□□□ 0.72
SHISA4-201ENST00000362011 POU5F2Q8N7G0 328 aa19.53■□□□□ 0.72
SHISA4-201ENST00000362011 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.53■□□□□ 0.72
SHISA4-201ENST00000362011 GFM2Q969S9 779 aaKnown RBP19.53■□□□□ 0.72
SHISA4-201ENST00000362011 NDC1Q9BTX1 674 aa19.53■□□□□ 0.72
SHISA4-201ENST00000362011 NPLQ9BXD5 320 aaPredicted RBP19.53■□□□□ 0.72
SHISA4-201ENST00000362011 CLMPQ9H6B4 373 aa19.53■□□□□ 0.72
SHISA4-201ENST00000362011 CUTCQ9NTM9 273 aa19.53■□□□□ 0.72
SHISA4-201ENST00000362011 OCIAD1Q9NX40 245 aa19.53■□□□□ 0.72
SHISA4-201ENST00000362011 PHF11Q9UIL8 331 aa19.53■□□□□ 0.72
SHISA4-201ENST00000362011 C9JVG2 144 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 SCAMP2O15127 329 aaKnown RBP19.52■□□□□ 0.72
SHISA4-201ENST00000362011 MED26O95402 600 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 NSA2O95478 260 aaKnown RBP19.52■□□□□ 0.72
SHISA4-201ENST00000362011 CBX6O95503 412 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 ESRRAP11474 423 aaPredicted RBP19.52■□□□□ 0.72
SHISA4-201ENST00000362011 AVPR1BP47901 424 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 HNRNPH2P55795 449 aaKnown RBP19.52■□□□□ 0.72
SHISA4-201ENST00000362011 RCAN2Q14206 197 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 HEPACAMQ14CZ8 416 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 DPY19L1Q2PZI1 675 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 DHRS13Q6UX07 377 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 R3HCC1LQ7Z5L2 792 aaKnown RBP19.52■□□□□ 0.72
SHISA4-201ENST00000362011 PDSS2Q86YH6 399 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 EFCAB3Q8N7B9 438 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 OR9A4Q8NGU2 314 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 TSPEARQ8WU66 669 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 TESCQ96BS2 214 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 SPDL1Q96EA4 605 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 DEPDC7Q96QD5 511 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 SLC25A23Q9BV35 468 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 FAIM2Q9BWQ8 316 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 REEP4Q9H6H4 257 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 FBXW2Q9UKT8 454 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 SRPK3Q9UPE1 567 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 ASB4Q9Y574 426 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 NUP214P35658 2090 aaPredicted RBP19.52■□□□□ 0.72
SHISA4-201ENST00000362011 CCDC88CQ9P219 2028 aa19.52■□□□□ 0.72
SHISA4-201ENST00000362011 A0A0A6YYC8 382 aaPredicted RBP19.51■□□□□ 0.71
SHISA4-201ENST00000362011 LOC100653049A0A140TA62 436 aa19.51■□□□□ 0.71
SHISA4-201ENST00000362011 DYTNA2CJ06 578 aa19.51■□□□□ 0.71
SHISA4-201ENST00000362011 ZNF860A6NHJ4 632 aa19.51■□□□□ 0.71
SHISA4-201ENST00000362011 I3L1I5 382 aaPredicted RBP19.51■□□□□ 0.71
SHISA4-201ENST00000362011 FOXS1O43638 330 aa19.51■□□□□ 0.71
SHISA4-201ENST00000362011 KRT34O76011 436 aa19.51■□□□□ 0.71
SHISA4-201ENST00000362011 MT-CO3P00414 261 aa19.51■□□□□ 0.71
SHISA4-201ENST00000362011 COX7A2P14406 83 aa19.51■□□□□ 0.71
SHISA4-201ENST00000362011 CD1EP15812 388 aa19.51■□□□□ 0.71
SHISA4-201ENST00000362011 CALB2P22676 271 aa19.51■□□□□ 0.71
SHISA4-201ENST00000362011 GCGRP47871 477 aa19.51■□□□□ 0.71
SHISA4-201ENST00000362011 BNIP1Q12981 228 aa19.51■□□□□ 0.71
SHISA4-201ENST00000362011 RUNX2Q13950 521 aa19.51■□□□□ 0.71
SHISA4-201ENST00000362011 UGT8Q16880 541 aa19.51■□□□□ 0.71
SHISA4-201ENST00000362011 ISXQ2M1V0 245 aa19.51■□□□□ 0.71
SHISA4-201ENST00000362011 GPR180Q86V85 440 aa19.51■□□□□ 0.71
SHISA4-201ENST00000362011 TMPRSS12Q86WS5 348 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms