RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ELOA3BQ3SY89 546 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 FAM122BQ7Z309 247 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 C12orf29Q8N999 325 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 C7orf57Q8NEG2 295 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ELOA3Q8NG57 546 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 SHISA4Q96DD7 197 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 A8MX80 341 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 G3V2L1 256 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 SLC25A14O95258 325 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 UBL4AP11441 157 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ITGB5P18084 799 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CDK6Q00534 326 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 E2F1Q01094 437 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 METTL11BQ5VVY1 283 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ZDHHC20Q5W0Z9 365 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 APOBEC3HQ6NTF7 200 aaKnown RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 C3orf33Q6P1S2 294 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 HS3ST5Q8IZT8 346 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CRB3Q9BUF7 120 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 PTGDR2Q9Y5Y4 395 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 C2orf92A0A1B0GVN3 265 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 RHOQP17081 205 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CELP19835 753 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 SHMT2P34897 504 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 OR4F3Q6IEY1 312 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 THRSPQ92748 146 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 PYCR2Q96C36 320 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF354BQ96LW1 612 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 PEBP4Q96S96 227 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 RSPH9Q9H1X1 276 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ABCC13Q9NSE7 274 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 MRPL15Q9P015 296 aaKnown RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CDC7O00311 574 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 MAOBP27338 520 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 MAGEA11P43364 429 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 OR3A2P47893 321 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 HACD4Q5VWC8 232 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 LINC00471Q8N535 108 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 OR4C6Q8NH72 309 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 RTP4Q96DX8 246 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CNN2Q99439 309 aaKnown RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 BCAS3Q9H6U6 928 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 C14orf105Q9NVL8 296 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ALDH1A2O94788 518 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 HLA-FP30511 346 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 PTGER3P43115 390 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 AVPR1BP47901 424 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ERVK-21P61565 698 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 PCBP1Q15365 356 aaKnown RBP eCLIP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 FLYWCH1Q4VC44 716 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 FANK1Q8TC84 345 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CHFRQ96EP1 664 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 SCGB3A2Q96PL1 93 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 C6orf47O95873 294 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ARL2P36404 184 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 AGTR2P50052 363 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF169Q14929 603 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 SPHARQ15513 63 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 PAQR3Q6TCH7 311 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 DTX3Q8N9I9 347 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 MFSD8Q8NHS3 518 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CYP2S1Q96SQ9 504 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 DOHHQ9BU89 302 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 METTL17Q9H7H0 456 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 GBA2Q9HCG7 927 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 NDRG3Q9UGV2 375 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 SPATA31C2B4DYI2 1134 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 MCIDASD6RGH6 385 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 H7C1Q1 480 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 RCBTB2O95199 551 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 PRAMEF12O95522 483 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 IFNA21P01568 189 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 RAB3AP20336 220 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CD34P28906 385 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CCND3P30281 292 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 PYCR1P32322 319 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 TAP2Q03519 686 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 SFRP4Q6FHJ7 346 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 VSIG10LQ86VR7 867 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 GSKIPQ9P0R6 139 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ASH2LQ9UBL3 628 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 C14orf166Q9Y224 244 aaKnown RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 FN1P02751 2386 aaKnown RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ZCCHC11Q5TAX3 1644 aaKnown RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 OR51F1A6NGY5 319 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ALPPP05187 535 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 GABRB3P28472 473 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 SLC39A12Q504Y0 691 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ARL14Q8N4G2 192 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 UPF1Q92900 1129 aaKnown RBP eCLIP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 TMEM125Q96AQ2 219 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 S100A16Q96FQ6 103 aaKnown RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 HERPUD2Q9BSE4 406 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 SYT11Q9BT88 431 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CNTNAP1P78357 1384 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 LCHNA4D1U4 455 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 WNT9AO14904 365 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 NKRFO15226 690 aaKnown RBP eCLIP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CSN2P05814 226 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CFHP08603 1231 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms