RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 CTXN3Q4LDR2 81 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 RUNDC3AQ59EK9 446 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 MIB1Q86YT6 1006 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 TMEM132CQ8N3T6 1108 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 TOP6BLQ8N6T0 577 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 C3orf30Q96M34 536 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 SPSB2Q99619 263 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 DPYSL5Q9BPU6 564 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 MED18Q9BUE0 208 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 CPEB1Q9BZB8 566 aaKnown RBP8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 CRISPLD1Q9H336 500 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 SLC52A3Q9NQ40 469 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 PIGVQ9NUD9 493 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 NSMCE4AQ9NXX6 385 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 C3orf18Q9UK00 162 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 ADAM30Q9UKF2 790 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 ARGFXA6NJG6 315 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 FAM72CH0Y354 149 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 I6L893 689 aaPredicted RBP8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 GABRDO14764 452 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 PRF1P14222 555 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 WARSP23381 471 aaKnown RBP8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 MGAT1P26572 445 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 ACADLP28330 430 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 ALDH9A1P49189 494 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 HNMTP50135 292 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 LIMK2P53671 638 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 SESN2P58004 480 aaPredicted RBP8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 CYP4F8P98187 520 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 TRAM2Q15035 370 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 TSC22D1Q15714 1073 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 FAM72AQ5TYM5 149 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 BSPRYQ5W0U4 402 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 SLC25A25Q6KCM7 469 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 FAM72DQ6L9T8 149 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 FUT10Q6P4F1 479 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 LARP4Q71RC2 724 aaKnown RBP eCLIP8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 KANSL1Q7Z3B3 1105 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 FAM72BQ86X60 149 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 PGBD5Q8N414 524 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 FSTL5Q8N475 847 aaPredicted RBP8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 STYXQ8WUJ0 223 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 SLC13A3Q8WWT9 602 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 EXOSC8Q96B26 276 aaKnown RBP8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 ZBED6CLQ96FA7 236 aaPredicted RBP8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 CMTM3Q96MX0 182 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 QKIQ96PU8 341 aaKnown RBP eCLIP8.94□□□□□ -0.983e-6■■■■□ 24.8
SMARCAL1-202ENST00000358207 CMSS1Q9BQ75 279 aaKnown RBP8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 C3orf14Q9HBI5 128 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 SLCO1C1Q9NYB5 712 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 KIF25Q9UIL4 384 aa8.94□□□□□ -0.98
SMARCAL1-202ENST00000358207 ZNF318Q5VUA4 2279 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 NEMP2A6NFY4 417 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 MPTX1A8MV57 137 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 AKAP8O43823 692 aaKnown RBP8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 VEGFDO43915 354 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 WBP4O75554 376 aaKnown RBP8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 RD3LP0DJH9 198 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 RAP2AP10114 183 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 EFNA1P20827 205 aaPredicted RBP8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 CLDN20P56880 219 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 BHLHB9Q6PI77 547 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 CYP4Z1Q86W10 505 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 ZDHHC17Q8IUH5 632 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 CCDC71Q8IV32 467 aaPredicted RBP8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 SPATA6LQ8N4H0 392 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 KLHL36Q8N4N3 616 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 FAM181AQ8N9Y4 354 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 VN1R2Q8NFZ6 395 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 C2CD4CQ8TF44 421 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 SETD7Q8WTS6 366 aaKnown RBP8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 TCEAL3Q969E4 200 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 NSMCE2Q96MF7 247 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 SLC29A3Q9BZD2 475 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 CLEC4MQ9H2X3 399 aaPredicted RBP8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 RASSF1Q9NS23 344 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 NDRG3Q9UGV2 375 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 ING4Q9UNL4 249 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 PKP3Q9Y446 797 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 ASPDHA6ND91 283 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 BBIP1A8MTZ0 92 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 OAZ2O95190 189 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 CST1P01037 141 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 MPOP05164 745 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 CD72P21854 359 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 RPS19P39019 145 aaKnown RBP8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 LHX1P48742 406 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 DCDC1P59894 354 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 DOC2BQ14184 412 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 ERV3-1Q14264 604 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 WSCD2Q2TBF2 565 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 NHLRC3Q5JS37 347 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 IL31Q6EBC2 164 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 ENPP6Q6UWR7 440 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 USP53Q70EK8 1073 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 ADGRD2Q7Z7M1 963 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 DTWD1Q8N5C7 304 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 OR11H7Q8NGC8 314 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 DNASE1L2Q92874 299 aa8.93□□□□□ -0.98
SMARCAL1-202ENST00000358207 ZDHHC12Q96GR4 267 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms