RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ERMP1Q7Z2K6 904 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 TMEM151BQ8IW70 566 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 NKD1Q969G9 470 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 FCRL1Q96LA6 429 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 C1orf50Q9BV19 199 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 NPLQ9BXD5 320 aaPredicted RBP14.04□□□□□ -0.16
CCNE1-202ENST00000357943 RBCK1Q9BYM8 510 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 EPN3Q9H201 632 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 KCMF1Q9P0J7 381 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 ATG4BQ9Y4P1 393 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 ASB4Q9Y574 426 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 A0A0G2JND7 137 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 GNG14A0A1W2PPG7 69 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 GMNCA6NCL1 334 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 FAM227AF5H4B4 570 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 CNOT3O75175 753 aaKnown RBP14.04□□□□□ -0.16
CCNE1-202ENST00000357943 VPS4BO75351 444 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 JRKO75564 520 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 ANXA4P09525 319 aaPredicted RBP14.04□□□□□ -0.16
CCNE1-202ENST00000357943 FAM58BPP0C7Q3 252 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 LIPCP11150 499 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 TCN2P20062 427 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 TACR1P25103 407 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 XCR1P46094 333 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 MAPK12P53778 367 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 NXNQ6DKJ4 435 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 MRPL14Q6P1L8 145 aaKnown RBP14.04□□□□□ -0.16
CCNE1-202ENST00000357943 CACNA2D3Q8IZS8 1091 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 GATA6Q92908 595 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 CSF3RQ99062 836 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 TMEM121BQ9BXQ6 578 aaPredicted RBP14.04□□□□□ -0.16
CCNE1-202ENST00000357943 FAM107BQ9H098 131 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 LYRM4Q9HD34 91 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 TEX10Q9NXF1 929 aaPredicted RBP14.04□□□□□ -0.16
CCNE1-202ENST00000357943 ZNF282Q9UDV7 671 aaPredicted RBP14.04□□□□□ -0.16
CCNE1-202ENST00000357943 CROTQ9UKG9 612 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 TMED5Q9Y3A6 229 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 IGLV3-12A0A075B6K2 115 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 LOC101059948A0A1B0GTJ6 334 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 TLX3O43711 291 aaPredicted RBP14.03□□□□□ -0.16
CCNE1-202ENST00000357943 PRKRAO75569 313 aaKnown RBP14.03□□□□□ -0.16
CCNE1-202ENST00000357943 CDC123O75794 336 aaPredicted RBP14.03□□□□□ -0.16
CCNE1-202ENST00000357943 MYO1DO94832 1006 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 BMP10O95393 424 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 ALDOCP09972 364 aaKnown RBP14.03□□□□□ -0.16
CCNE1-202ENST00000357943 TROVE2P10155 538 aaKnown RBP eCLIP14.03□□□□□ -0.16
CCNE1-202ENST00000357943 PIM1P11309 404 aaPredicted RBP14.03□□□□□ -0.16
CCNE1-202ENST00000357943 LBPP18428 481 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 STAT5AP42229 794 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 DIO3P55073 304 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 NCF4Q15080 339 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 LSM12Q3MHD2 195 aaKnown RBP14.03□□□□□ -0.16
CCNE1-202ENST00000357943 FAM69BQ5VUD6 431 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 IL23RQ5VWK5 629 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 SHISA6Q6ZSJ9 500 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 GPR180Q86V85 440 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 IL22RA1Q8N6P7 574 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 EFCAB3Q8N7B9 438 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 FAM47BQ8NA70 645 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 STT3BQ8TCJ2 826 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 ACTRT2Q8TDY3 377 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 CT55Q8WUE5 264 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 TM4SF18Q96CE8 201 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 EGLN2Q96KS0 407 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 RABEP2Q9H5N1 569 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 CLK4Q9HAZ1 481 aaKnown RBP14.03□□□□□ -0.16
CCNE1-202ENST00000357943 MKKSQ9NPJ1 570 aaPredicted RBP14.03□□□□□ -0.16
CCNE1-202ENST00000357943 BAIAP2L1Q9UHR4 511 aa14.03□□□□□ -0.16
CCNE1-202ENST00000357943 A0A1W2PR48 441 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 OR2W5A6NFC9 320 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 C9J4A7 227 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 CYR61O00622 381 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 PROM1O43490 865 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 ALBP02768 609 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 ZGLP1P0C6A0 271 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 BCKDHAP12694 445 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 RNH1P13489 461 aaKnown RBP14.02□□□□□ -0.16
CCNE1-202ENST00000357943 SDC1P18827 310 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 DRD4P21917 467 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 CPN2P22792 545 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 F8A1P23610 371 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 HNRNPFP52597 415 aaKnown RBP14.02□□□□□ -0.16
CCNE1-202ENST00000357943 RAB38P57729 211 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 TAS2R50P59544 299 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 ERVK-8P63133 956 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 OCA2Q04671 838 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 EMX2Q04743 252 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 ZNF763Q0D2J5 394 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 NKG7Q16617 165 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 TMEM198Q66K66 360 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 C18orf63Q68DL7 685 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 LAPTM4BQ86VI4 370 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 ZC3H7AQ8IWR0 971 aaKnown RBP14.02□□□□□ -0.16
CCNE1-202ENST00000357943 PRSS58Q8IYP2 241 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 MMP21Q8N119 569 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 TMEM52Q8NDY8 209 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 CEP70Q8NHQ1 597 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 C16orf78Q8WTQ4 265 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 FGF11Q92914 225 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 UCN3Q969E3 161 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms