RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 ILKQ13418 452 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 CARTPTQ16568 116 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 THOC7Q6I9Y2 204 aaKnown RBP16.93■□□□□ 0.3
RTN4-204ENST00000357732 ZNF852Q6ZMS4 543 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 HS6ST3Q8IZP7 471 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 CELF2-AS1Q8N7Q2 184 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 GPR156Q8NFN8 814 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 PPP1R16AQ96I34 528 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 ASPNQ9BXN1 380 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 NMNAT1Q9HAN9 279 aaPredicted RBP16.93■□□□□ 0.3
RTN4-204ENST00000357732 HHATLQ9HCP6 504 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 MRPL17Q9NRX2 175 aaKnown RBP16.93■□□□□ 0.3
RTN4-204ENST00000357732 SPATA7Q9P0W8 599 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 ICKQ9UPZ9 632 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 MGAT4BQ9UQ53 548 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 INSL5Q9Y5Q6 135 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 PRAMEF33A0A0G2JMD5 474 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 SLC5A10A0PJK1 596 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 ZNF670-ZNF695F2Z2N8 137 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 CTDSP2O14595 271 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 BNIP3LO60238 219 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 PRAMEF10O60809 474 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 SLC16A8O95907 504 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 DNTTP04053 509 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 OSMP13725 252 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 CNR2P34972 360 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 STK19P49842 368 aaPredicted RBP16.92■□□□□ 0.3
RTN4-204ENST00000357732 RUNX1T1Q06455 604 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 FAM71E1Q6IPT2 247 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 GDPD4Q6W3E5 623 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 DPY19L3Q6ZPD9 716 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 COMMD6Q7Z4G1 85 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 NATD1Q8N6N6 113 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 OR4K1Q8NGD4 311 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 GTPBP3Q969Y2 492 aaKnown RBP16.92■□□□□ 0.3
RTN4-204ENST00000357732 TMEM80Q96HE8 168 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 WRAP53Q9BUR4 548 aaKnown RBP16.92■□□□□ 0.3
RTN4-204ENST00000357732 STUB1Q9UNE7 303 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 RPL36Q9Y3U8 105 aaKnown RBP16.92■□□□□ 0.3
RTN4-204ENST00000357732 TRBC2A0A5B9 178 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 PITPNM1O00562 1244 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 NPC1O15118 1278 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 LGI1O95970 557 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 DDX5P17844 614 aaKnown RBP16.92■□□□□ 0.3
RTN4-204ENST00000357732 PRLHRP49683 370 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 SLC5A12Q1EHB4 618 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 HENMT1Q5T8I9 393 aaKnown RBP16.92■□□□□ 0.3
RTN4-204ENST00000357732 TMPRSS11AQ6ZMR5 421 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 ZNF517Q6ZMY9 492 aaPredicted RBP16.92■□□□□ 0.3
RTN4-204ENST00000357732 RAB43Q86YS6 212 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 CLIP4Q8N3C7 705 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 FAM181AQ8N9Y4 354 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 OR9Q1Q8NGQ5 310 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 TP53INP1Q96A56 240 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 PKP4Q99569 1192 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 DMRT3Q9NQL9 472 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 PRDM8Q9NQV8 689 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 NDUFB11Q9NX14 153 aa16.92■□□□□ 0.3
RTN4-204ENST00000357732 TLR4O00206 839 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 GASTP01350 101 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 TCEA1P23193 301 aaKnown RBP16.91■□□□□ 0.3
RTN4-204ENST00000357732 CTSOP43234 321 aaPredicted RBP16.91■□□□□ 0.3
RTN4-204ENST00000357732 SPHARQ15513 63 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 HIST2H2AA3Q6FI13 130 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 REEP3Q6NUK4 255 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 OR8H2Q8N162 312 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 PROKR2Q8NFJ6 384 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 MRPS31Q92665 395 aaKnown RBP16.91■□□□□ 0.3
RTN4-204ENST00000357732 NEIL2Q969S2 332 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 UCK2Q9BZX2 261 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 CFAP97Q9P2B7 532 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 CD84Q9UIB8 345 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 TMCC3Q9ULS5 477 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 V9GYH0 126 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 HYKKA2RU49 373 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 J3KTA2 159 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 UQCRC2P22695 453 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 DSTNP60981 165 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 MLLT11Q13015 90 aaPredicted RBP16.91■□□□□ 0.3
RTN4-204ENST00000357732 C1DQ13901 141 aaKnown RBP16.91■□□□□ 0.3
RTN4-204ENST00000357732 BCL7AQ4VC05 210 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 ATAD3CQ5T2N8 411 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 ARMC4Q5T2S8 1044 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 LILRB4Q8NHJ6 448 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 C16orf78Q8WTQ4 265 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 BTN2A2Q8WVV5 523 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 APOBEC4Q8WW27 367 aaKnown RBP16.91■□□□□ 0.3
RTN4-204ENST00000357732 PDXPQ96GD0 296 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 DHRS1Q96LJ7 313 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 TEFMQ96QE5 360 aaKnown RBP16.91■□□□□ 0.3
RTN4-204ENST00000357732 KCNS3Q9BQ31 491 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 ROGDIQ9GZN7 287 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 TMEM245Q9H330 911 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 ERVK13-1Q9NX77 482 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 TAS2R16Q9NYV7 291 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 OGDHLQ9ULD0 1010 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 DYRK1BQ9Y463 629 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 N6AMT1Q9Y5N5 214 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 SNX8Q9Y5X2 465 aa16.91■□□□□ 0.3
RTN4-204ENST00000357732 A0A1W2PRB8 838 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms