RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 TMEM45AQ9NWC5 275 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 FAM120CQ9NX05 1096 aaKnown RBP8.73□□□□□ -1.01
UPF2-202ENST00000357604 ST6GAL1P15907 406 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 GM2AP17900 193 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 PCLAFQ15004 111 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 OPN5Q6U736 354 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 MED25Q71SY5 747 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 L3MBTL4Q8NA19 623 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 ZHX1-C8orf76Q96EF9 292 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 JSRP1Q96MG2 331 aaPredicted RBP8.73□□□□□ -1.01
UPF2-202ENST00000357604 CCNL2Q96S94 520 aaPredicted RBP8.73□□□□□ -1.01
UPF2-202ENST00000357604 ATOH8Q96SQ7 321 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 PRRG4Q9BZD6 226 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 SRRM3A6NNA2 597 aaPredicted RBP8.73□□□□□ -1.01
UPF2-202ENST00000357604 SLC25A12O75746 678 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 CBX1P83916 185 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 CLEC6AQ6EIG7 209 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 SBSNQ6UWP8 590 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 TMPRSS7Q7RTY8 843 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 PLD3Q8IV08 490 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 EID2BQ96D98 161 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 ALOXE3Q9BYJ1 711 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 ADAP2Q9NPF8 381 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 TCF20Q9UGU0 1960 aaKnown RBP8.73□□□□□ -1.01
UPF2-202ENST00000357604 HYAL3O43820 417 aaPredicted RBP8.73□□□□□ -1.01
UPF2-202ENST00000357604 LRATO95237 230 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 FGF5P12034 268 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 CERS1P27544 350 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 ADSLP30566 484 aaPredicted RBP8.73□□□□□ -1.01
UPF2-202ENST00000357604 HSD17B7P56937 341 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 INSM1Q01101 510 aaPredicted RBP8.73□□□□□ -1.01
UPF2-202ENST00000357604 ZNF267Q14586 743 aaPredicted RBP8.73□□□□□ -1.01
UPF2-202ENST00000357604 KCNAB1Q14722 419 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 FBXO48Q5FWF7 155 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 PAQR7Q86WK9 346 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 GPALPP1Q8IXQ4 340 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 OR4K17Q8NGC6 315 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 VMP1Q96GC9 406 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 OR8D2Q9GZM6 311 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 EVA1AQ9H8M9 152 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 CD248Q9HCU0 757 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 SERINC1Q9NRX5 453 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 TAGLN3Q9UI15 199 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 SCDO00767 359 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 SNRPB2P08579 225 aaKnown RBP8.72□□□□□ -1.01
UPF2-202ENST00000357604 ECHS1P30084 290 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 MAGEA12P43365 314 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 RHDQ02161 417 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 HSPB3Q12988 150 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 MEP1AQ16819 746 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 ZSWIM7Q19AV6 140 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 GCNT6Q5T4J0 391 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 CDK20Q8IZL9 346 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 ZCCHC7Q8N3Z6 543 aaKnown RBP8.72□□□□□ -1.01
UPF2-202ENST00000357604 PROX1Q92786 737 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 MECRQ9BV79 373 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 TBL1XR1Q9BZK7 514 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 CHRNA10Q9GZZ6 450 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 AGPAT4Q9NRZ5 378 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 A0A0G2JN53 185 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 FAM234BA2RU67 622 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 ZNF860A6NHJ4 632 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 EMC8O43402 210 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 PTPN4P29074 926 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 PLCXD2Q0VAA5 305 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 SQSTM1Q13501 440 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 LILRA3Q8N6C8 439 aaPredicted RBP8.72□□□□□ -1.01
UPF2-202ENST00000357604 TSSK3Q96PN8 268 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 SH3GL2Q99962 352 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 WDR54Q9H977 334 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 MYNNQ9NPC7 610 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 GPR27Q9NS67 375 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 PRAMEF33A0A0G2JMD5 474 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 PRORSD1PA6NEY8 169 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 C17orf105B2RV13 164 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 SLC28A2O43868 658 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 PRAMEF10O60809 474 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 NPPBP16860 134 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 SERPINB3P29508 390 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 SSR4P51571 173 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 CCL11P51671 97 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 AIMP2Q13155 320 aaKnown RBP8.72□□□□□ -1.01
UPF2-202ENST00000357604 DSG2Q14126 1118 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 TPRG1LQ5T0D9 272 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 METTL21CQ5VZV1 264 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 BORAQ6PGQ7 559 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 CYHR1Q6ZMK1 362 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 PLD6Q8N2A8 252 aaKnown RBP8.72□□□□□ -1.01
UPF2-202ENST00000357604 MORN4Q8NDC4 146 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 ABHD11Q8NFV4 315 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 GIMAP7Q8NHV1 300 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 DNAJA2O60884 412 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 HIST1H1TP22492 207 aaPredicted RBP8.72□□□□□ -1.01
UPF2-202ENST00000357604 UQCRC2P22695 453 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 SLC6A12P48065 614 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 KLC1Q07866 573 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 TTMPQ5BVD1 217 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 PACS2Q86VP3 889 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 C10orf53Q8N6V4 93 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 ACOT4Q8N9L9 421 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms