RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 TIGARQ9NQ88 270 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 ZNF282Q9UDV7 671 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-205ENST00000357568 ZNF106Q9H2Y7 1883 aaKnown RBP10.2□□□□□ -0.78
CAPN3-205ENST00000357568 TMEM265A0A087WTH1 108 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 SLC12A8A0AV02 714 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 F5H5T6 163 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 PRKAR1AP10644 381 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 HSD3B1P14060 373 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 HSD3B2P26439 372 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 HMGCLP35914 325 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 HNMTP50135 292 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 CRISP1P54107 249 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 RRAS2P62070 204 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-205ENST00000357568 BTG1P62324 171 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 SPIBQ01892 262 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 PTGES3Q15185 160 aaKnown RBP10.2□□□□□ -0.78
CAPN3-205ENST00000357568 RGNQ15493 299 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 TATDN3Q17R31 274 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 BTBD16Q32M84 506 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 PTCHD4Q6ZW05 846 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 LAS2Q8IYD9 372 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 NANOGP1Q8N7R0 232 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 VPS37AQ8NEZ2 397 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 UTP15Q8TED0 518 aaKnown RBP10.2□□□□□ -0.78
CAPN3-205ENST00000357568 ELMO1Q92556 727 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 MAP6Q96JE9 813 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 PIP5K1AQ99755 562 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 NIPSNAP1Q9BPW8 284 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 C2orf49Q9BVC5 232 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-205ENST00000357568 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.2□□□□□ -0.78
CAPN3-205ENST00000357568 PRDM8Q9NQV8 689 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 MARCH2Q9P0N8 246 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 MOSPD1Q9UJG1 213 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 TMPRSS11EQ9UL52 423 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 FZD4Q9ULV1 537 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 RUVBL1Q9Y265 456 aaKnown RBP10.2□□□□□ -0.78
CAPN3-205ENST00000357568 RPL36Q9Y3U8 105 aaKnown RBP10.2□□□□□ -0.78
CAPN3-205ENST00000357568 RNF215Q9Y6U7 377 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 IQCF5A8MTL0 148 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 SGK494L7N484 410 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 CACNB4O00305 520 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-205ENST00000357568 ORC5O43913 435 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 CSO75390 466 aaKnown RBP10.2□□□□□ -0.78
CAPN3-205ENST00000357568 B3GAT3O94766 335 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 POMCP01189 267 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 CYP17A1P05093 508 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 RB1P06400 928 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 SRPRAP08240 638 aaKnown RBP10.2□□□□□ -0.78
CAPN3-205ENST00000357568 XCR1P46094 333 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 RGRP47804 291 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 CYP4F2P78329 520 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 EFEMP1Q12805 493 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 BAMBIQ13145 260 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 VEPH1Q14D04 833 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 OCLNQ16625 522 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 EXOC3L2Q2M3D2 409 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 SLC25A30Q5SVS4 291 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 LAMTOR1Q6IAA8 161 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 SYT12Q8IV01 421 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 GHDCQ8N2G8 530 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 OR4M1Q8NGD0 313 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 GOT1L1Q8NHS2 421 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-205ENST00000357568 GPR137Q96N19 417 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 TMEM38AQ9H6F2 299 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 NT5DC2Q9H857 520 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 ABCB9Q9NP78 766 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 EXOSC4Q9NPD3 245 aaKnown RBP10.2□□□□□ -0.78
CAPN3-205ENST00000357568 SNTG1Q9NSN8 517 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 TMEM184CQ9NVA4 438 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 PLEKHB1Q9UF11 243 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-205ENST00000357568 RAB23Q9ULC3 237 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 ALG5Q9Y673 324 aa10.2□□□□□ -0.78
CAPN3-205ENST00000357568 MRPL42Q9Y6G3 142 aaKnown RBP10.2□□□□□ -0.78
CAPN3-205ENST00000357568 SCN8AQ9UQD0 1980 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 MYL12BO14950 172 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 ADAP00813 363 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 TSPAN19P0C672 248 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 MSL3P1P0C860 447 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 CYP2A6P11509 494 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-205ENST00000357568 COX7A2P14406 83 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 MYL12AP19105 171 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 SDC2P34741 201 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 GPC1P35052 558 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 PPM1AP35813 382 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 GDF5P43026 501 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 BRCC3P46736 316 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 SLC6A12P48065 614 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 PTPN5P54829 565 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.19□□□□□ -0.78
CAPN3-205ENST00000357568 PAN2Q504Q3 1202 aaKnown RBP10.19□□□□□ -0.78
CAPN3-205ENST00000357568 ZBTB37Q5TC79 503 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 NADSYN1Q6IA69 706 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 FRMPD2BQ6IN97 320 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 NATD1Q8N6N6 113 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 SPPL2AQ8TCT8 520 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 UBASH3BQ8TF42 649 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 APIPQ96GX9 242 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 ZNF558Q96NG5 402 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 CITED4Q96RK1 184 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 DCLRE1CQ96SD1 692 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms