RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 PEX11GQ96HA9 241 aa23.99■■□□□ 1.43
SSBP3-202ENST00000357475 ROGDIQ9GZN7 287 aa23.99■■□□□ 1.43
SSBP3-202ENST00000357475 AIG1Q9NVV5 245 aa23.99■■□□□ 1.43
SSBP3-202ENST00000357475 NOP53Q9NZM5 478 aaKnown RBP23.99■■□□□ 1.43
SSBP3-202ENST00000357475 A0A088AWK7 358 aa23.98■■□□□ 1.43
SSBP3-202ENST00000357475 A0A1W2PR48 441 aa23.98■■□□□ 1.43
SSBP3-202ENST00000357475 WASHC1A8K0Z3 465 aa23.98■■□□□ 1.43
SSBP3-202ENST00000357475 MYO1DO94832 1006 aa23.98■■□□□ 1.43
SSBP3-202ENST00000357475 ZNF10P21506 573 aaPredicted RBP23.98■■□□□ 1.43
SSBP3-202ENST00000357475 FBLP22087 321 aaKnown RBP23.98■■□□□ 1.43
SSBP3-202ENST00000357475 RBMS1P29558 406 aaKnown RBP23.98■■□□□ 1.43
SSBP3-202ENST00000357475 NME5P56597 212 aa23.98■■□□□ 1.43
SSBP3-202ENST00000357475 TAS2R50P59544 299 aa23.98■■□□□ 1.43
SSBP3-202ENST00000357475 SHC2P98077 582 aa23.98■■□□□ 1.43
SSBP3-202ENST00000357475 MC1RQ01726 317 aa23.98■■□□□ 1.43
SSBP3-202ENST00000357475 DSG2Q14126 1118 aa23.98■■□□□ 1.43
SSBP3-202ENST00000357475 ERV3-1Q14264 604 aa23.98■■□□□ 1.43
SSBP3-202ENST00000357475 RTP5Q14D33 572 aa23.98■■□□□ 1.43
SSBP3-202ENST00000357475 TMEM52Q8NDY8 209 aa23.98■■□□□ 1.43
SSBP3-202ENST00000357475 OR51Q1Q8NH59 317 aa23.98■■□□□ 1.43
SSBP3-202ENST00000357475 LRFN5Q96NI6 719 aa23.98■■□□□ 1.43
SSBP3-202ENST00000357475 CTSFQ9UBX1 484 aa23.98■■□□□ 1.43
SSBP3-202ENST00000357475 CDC14AQ9UNH5 594 aa23.98■■□□□ 1.43
SSBP3-202ENST00000357475 EXO1Q9UQ84 846 aaKnown RBP23.98■■□□□ 1.43
SSBP3-202ENST00000357475 NUP210LQ5VU65 1888 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 UBDO15205 165 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 JRKO75564 520 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 LRATO95237 230 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 IL3P08700 152 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 HNRNPFP52597 415 aaKnown RBP23.97■■□□□ 1.43
SSBP3-202ENST00000357475 DCDP81605 110 aaKnown RBP23.97■■□□□ 1.43
SSBP3-202ENST00000357475 ZNF763Q0D2J5 394 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 SMU1Q2TAY7 513 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 SPATA19Q7Z5L4 167 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 CLNKQ7Z7G1 428 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 GPR180Q86V85 440 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 EFCAB3Q8N7B9 438 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 FAM47BQ8NA70 645 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.97■■□□□ 1.437e-6■■■■□ 22
SSBP3-202ENST00000357475 GFM2Q969S9 779 aaKnown RBP23.97■■□□□ 1.43
SSBP3-202ENST00000357475 YIPF2Q9BWQ6 316 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 NPLQ9BXD5 320 aaPredicted RBP23.97■■□□□ 1.43
SSBP3-202ENST00000357475 CHST8Q9H2A9 424 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 ACTL8Q9H568 366 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 ASIC5Q9NY37 505 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 TRPC4Q9UBN4 977 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 HEY2Q9UBP5 337 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 EIF3LQ9Y262 564 aaKnown RBP23.97■■□□□ 1.43
SSBP3-202ENST00000357475 AK5Q9Y6K8 562 aa23.97■■□□□ 1.43
SSBP3-202ENST00000357475 OR2W5A6NFC9 320 aa23.96■■□□□ 1.43
SSBP3-202ENST00000357475 CNOT3O75175 753 aaKnown RBP23.96■■□□□ 1.43
SSBP3-202ENST00000357475 C6orf15Q6UXA7 325 aaPredicted RBP23.96■■□□□ 1.43
SSBP3-202ENST00000357475 MR1Q95460 341 aa23.96■■□□□ 1.43
SSBP3-202ENST00000357475 LYRM4Q9HD34 91 aa23.96■■□□□ 1.43
SSBP3-202ENST00000357475 PCDHGA7Q9Y5G6 932 aa23.96■■□□□ 1.43
SSBP3-202ENST00000357475 GPR45Q9Y5Y3 372 aa23.96■■□□□ 1.43
SSBP3-202ENST00000357475 PROM1O43490 865 aa23.95■■□□□ 1.43
SSBP3-202ENST00000357475 AIFM1O95831 613 aa23.95■■□□□ 1.43
SSBP3-202ENST00000357475 ONECUT2O95948 504 aa23.95■■□□□ 1.43
SSBP3-202ENST00000357475 ACPPP15309 386 aa23.95■■□□□ 1.43
SSBP3-202ENST00000357475 CD1EP15812 388 aa23.95■■□□□ 1.43
SSBP3-202ENST00000357475 MAD2L1Q13257 205 aaPredicted RBP23.95■■□□□ 1.43
SSBP3-202ENST00000357475 VWA2Q5GFL6 755 aa23.95■■□□□ 1.43
SSBP3-202ENST00000357475 IGF2-ASQ6U949 168 aa23.95■■□□□ 1.43
SSBP3-202ENST00000357475 ZNF517Q6ZMY9 492 aaPredicted RBP23.95■■□□□ 1.43
SSBP3-202ENST00000357475 KRTCAP2Q8N6L1 136 aa23.95■■□□□ 1.43
SSBP3-202ENST00000357475 TEX37Q96LM6 180 aa23.95■■□□□ 1.43
SSBP3-202ENST00000357475 LYARQ9NX58 379 aaKnown RBP23.95■■□□□ 1.43
SSBP3-202ENST00000357475 MAP4K5Q9Y4K4 846 aa23.95■■□□□ 1.43
SSBP3-202ENST00000357475 CELSR3Q9NYQ7 3312 aa23.95■■□□□ 1.42
SSBP3-202ENST00000357475 GLOD5A6NK44 160 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 CYR61O00622 381 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 ANKRD28O15084 1053 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 AKAP10O43572 662 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 CDC123O75794 336 aaPredicted RBP23.94■■□□□ 1.42
SSBP3-202ENST00000357475 DXOO77932 396 aaKnown RBP23.94■■□□□ 1.42
SSBP3-202ENST00000357475 NCF2P19878 526 aaPredicted RBP23.94■■□□□ 1.42
SSBP3-202ENST00000357475 MAPK1P28482 360 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 XCR1P46094 333 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 EFNA3P52797 238 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 RAB38P57729 211 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 PRSS53Q2L4Q9 553 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 NDUFAF5Q5TEU4 345 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 FAM69BQ5VUD6 431 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 FAM71E1Q6IPT2 247 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 NIPAL1Q6NVV3 410 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 FAM198BQ6UWH4 519 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 BCAS4Q8TDM0 211 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 B3GNT4Q9C0J1 378 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 ZNF385DQ9H6B1 395 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 MYNNQ9NPC7 610 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 C5AR2Q9P296 337 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 COPG1Q9Y678 874 aaKnown RBP23.94■■□□□ 1.42
SSBP3-202ENST00000357475 C9JVG2 144 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 KLK3P07288 261 aaPredicted RBP23.94■■□□□ 1.42
SSBP3-202ENST00000357475 PRPS2P11908 318 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 CPN2P22792 545 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 UFM1P61960 85 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 SKP1P63208 163 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 TNFRSF17Q02223 184 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms