RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 ZMYM5Q9UJ78 669 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 CTDSP2O14595 271 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 ZBTB7AO95365 584 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 THP07101 528 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 SPHARQ15513 63 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 CELF3Q5SZQ8 465 aaKnown RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 ARMC12Q5T9G4 340 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 C3orf33Q6P1S2 294 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 IMP4Q96G21 291 aaKnown RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 C11orf16Q9NQ32 467 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 PDLIM7Q9NR12 457 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 ENAMQ9NRM1 1142 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 FGBP02675 491 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 PRG2P13727 222 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 GABRB3P28472 473 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 CLCN3P51790 818 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 ERVFC1P60507 584 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 CATSPEREQ5SY80 951 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 UNC5DQ6UXZ4 953 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 ADGRG3Q86Y34 549 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 NEIL3Q8TAT5 605 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 FBLIM1Q8WUP2 373 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 ZBTB45Q96K62 511 aaPredicted RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 ZFP42Q96MM3 310 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 SLIRPQ9GZT3 109 aaKnown RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 OPA3Q9H6K4 179 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 NPFFR2Q9Y5X5 522 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 SOWAHBA6NEL2 793 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 GHDCQ8N2G8 530 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 CELF6Q96J87 481 aaKnown RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 C1QTNF7Q9BXJ2 289 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 PSORS1C1Q9UIG5 152 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 TSR3Q9UJK0 312 aaKnown RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 PCDHB11Q9Y5F2 797 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 CHD5Q8TDI0 1954 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 TGOLN2O43493 480 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 STSP08842 583 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 COL6A1P12109 1028 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 SRCP12931 536 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 PPP3CBP16298 524 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 ZNF3P17036 446 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 TNFSF8P32971 234 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 CENPAP49450 140 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 RHEBQ15382 184 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 GAREM2Q75VX8 874 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 ZNF534Q76KX8 674 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 NPAS3Q8IXF0 933 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 C12orf45Q8N5I9 185 aaPredicted RBP6.32□□□□□ -1.4
TRIM38-201ENST00000357085 OR5J2Q8NH18 312 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 S100PBPQ96BU1 408 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 PDLIM5Q96HC4 596 aaKnown RBP6.32□□□□□ -1.4
TRIM38-201ENST00000357085 ANKRD19PQ9H560 264 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 PCTPQ9UKL6 214 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 PTPRFP10586 1907 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 PITPNBP48739 271 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 AFF1P51825 1210 aaKnown RBP6.32□□□□□ -1.4
TRIM38-201ENST00000357085 CRISP3P54108 245 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 RPL19P84098 196 aaKnown RBP6.32□□□□□ -1.4
TRIM38-201ENST00000357085 UBE2NLQ5JXB2 153 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 ZNF425Q6IV72 752 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 DOK6Q6PKX4 331 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 ELP4Q96EB1 424 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 POLMQ9NP87 494 aaPredicted RBP6.32□□□□□ -1.4
TRIM38-201ENST00000357085 WASH6PQ9NQA3 447 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 SDHAF2Q9NX18 166 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 ZNF69Q9UC07 566 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 A0A0G2JMZ2 1700 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 LRRC37A2A6NM11 1700 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 PATJQ8NI35 1801 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 TRDV1A0A1B0GX56 115 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 PAGE1O75459 146 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 EGFP01133 1207 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 TAL1P17542 331 aaPredicted RBP6.32□□□□□ -1.4
TRIM38-201ENST00000357085 KCNQ1P51787 676 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 NUDT6P53370 316 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 CTBSQ01459 385 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 IRF4Q15306 451 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 DOK7Q18PE1 504 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.32□□□□□ -1.4
TRIM38-201ENST00000357085 GPR65Q8IYL9 337 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 PDXPQ96GD0 296 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 ST6GAL2Q96JF0 529 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 FCRL3Q96P31 734 aaPredicted RBP6.32□□□□□ -1.4
TRIM38-201ENST00000357085 C11orf54Q9H0W9 315 aaPredicted RBP6.32□□□□□ -1.4
TRIM38-201ENST00000357085 GSTO2Q9H4Y5 243 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 RDH14Q9HBH5 336 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 BRD7Q9NPI1 651 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 MED9Q9NWA0 146 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 ENTPD4Q9Y227 616 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 ACTL7AQ9Y615 435 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 TANC1Q9C0D5 1861 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 C1orf196B1AJZ1 125 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 GIPP09681 153 aaPredicted RBP6.32□□□□□ -1.4
TRIM38-201ENST00000357085 OR1E1P30953 314 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 PRR5P85299 388 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 IRF8Q02556 426 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 SCARB2Q14108 478 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 AANATQ16613 207 aa6.32□□□□□ -1.4
TRIM38-201ENST00000357085 HES5Q5TA89 166 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms