RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 UPK1AO00322 258 aa13.19□□□□□ -0.3
LSS-201ENST00000356396 ZBTB11O95625 1053 aaPredicted RBP13.19□□□□□ -0.3
LSS-201ENST00000356396 LDLRP01130 860 aa13.19□□□□□ -0.3
LSS-201ENST00000356396 PRIM2P49643 509 aa13.19□□□□□ -0.3
LSS-201ENST00000356396 VSX2P58304 361 aaPredicted RBP13.19□□□□□ -0.3
LSS-201ENST00000356396 CSTF3Q12996 717 aaKnown RBP13.19□□□□□ -0.3
LSS-201ENST00000356396 LASP1Q14847 261 aaKnown RBP13.19□□□□□ -0.3
LSS-201ENST00000356396 RGNQ15493 299 aa13.19□□□□□ -0.3
LSS-201ENST00000356396 DUSP7Q16829 419 aa13.19□□□□□ -0.3
LSS-201ENST00000356396 COMTD1Q86VU5 262 aa13.19□□□□□ -0.3
LSS-201ENST00000356396 OXR1Q8N573 874 aa13.19□□□□□ -0.3
LSS-201ENST00000356396 HORMAD2Q8N7B1 307 aa13.19□□□□□ -0.3
LSS-201ENST00000356396 NECTIN4Q96NY8 510 aa13.19□□□□□ -0.3
LSS-201ENST00000356396 ARMC7Q9H6L4 198 aa13.19□□□□□ -0.3
LSS-201ENST00000356396 RMND5AQ9H871 391 aa13.19□□□□□ -0.3
LSS-201ENST00000356396 SIRT5Q9NXA8 310 aa13.19□□□□□ -0.3
LSS-201ENST00000356396 MGAQ8IWI9 3026 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 ZW10O43264 779 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 GMFGO60234 142 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 PPP2R1BP30154 601 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 GZMMP51124 257 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 ILF3Q12906 894 aaKnown RBP eCLIP13.18□□□□□ -0.3
LSS-201ENST00000356396 BLMHQ13867 455 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 EOGTQ5NDL2 527 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 FAM69BQ5VUD6 431 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 KRT80Q6KB66 452 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 UNC5DQ6UXZ4 953 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 VN1R4Q7Z5H5 301 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 ZZZ3Q8IYH5 903 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 KRT78Q8N1N4 520 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 TMEM52Q8NDY8 209 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 MUS81Q96NY9 551 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 RASSF1Q9NS23 344 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 RLIMQ9NVW2 624 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 MAU2Q9Y6X3 613 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 CXorf51AA0A1B0GTR3 108 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 CLOCKO15516 846 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 FOXD2O60548 495 aaPredicted RBP13.18□□□□□ -0.3
LSS-201ENST00000356396 OR12D1P0DN82 309 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 ST6GAL1P15907 406 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 AGXTP21549 392 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 HTR1EP28566 365 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 VASPP50552 380 aaPredicted RBP13.18□□□□□ -0.3
LSS-201ENST00000356396 EEFSECP57772 596 aaKnown RBP13.18□□□□□ -0.3
LSS-201ENST00000356396 CCDC157Q569K6 752 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 C6orf132Q5T0Z8 1188 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 CCNJQ5T5M9 372 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 FBXO42Q6P3S6 717 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 ZDHHC21Q8IVQ6 265 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.18□□□□□ -0.32e-6■■■□□ 17.1
LSS-201ENST00000356396 LAS2Q8IYD9 372 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 METTL4Q8N3J2 472 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 ACOT4Q8N9L9 421 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 CCT7Q99832 543 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 TRIM4Q9C037 500 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 SLC24A3Q9HC58 644 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 WSB2Q9NYS7 404 aaPredicted RBP13.18□□□□□ -0.3
LSS-201ENST00000356396 CPNE7Q9UBL6 633 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 ACSL5Q9ULC5 683 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 DOLKQ9UPQ8 538 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 PCDHB3Q9Y5E6 796 aa13.18□□□□□ -0.3
LSS-201ENST00000356396 A0A096LPI6 279 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 SGK494L7N484 410 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 CASQ2O14958 399 aaPredicted RBP13.17□□□□□ -0.3
LSS-201ENST00000356396 IGFBP1P08833 259 aaPredicted RBP13.17□□□□□ -0.3
LSS-201ENST00000356396 F3P13726 295 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 PKLRP30613 574 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 ABHD18Q0P651 414 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 TRAP1Q12931 704 aaKnown RBP13.17□□□□□ -0.3
LSS-201ENST00000356396 NHSL2Q5HYW2 709 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 FAM71E1Q6IPT2 247 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 LCTLQ6UWM7 567 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 UGT2A3Q6UWM9 527 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 CEACAM20Q6UY09 585 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 OR9A2Q8NGT5 310 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 NMD3Q96D46 503 aaKnown RBP13.17□□□□□ -0.3
LSS-201ENST00000356396 LRRC61Q9BV99 259 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 EHD3Q9NZN3 535 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 NTNG1Q9Y2I2 539 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 TECTAO75443 2155 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 IGHV1OR15-9A0A0B4J2B8 117 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 SRFP11831 508 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 UGT2B7P16662 529 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 AKT2P31751 481 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 SHMT2P34897 504 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 NCBP2P52298 156 aaKnown RBP eCLIP13.17□□□□□ -0.31e-11■■□□□ 12.1
LSS-201ENST00000356396 MVDP53602 400 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 HHEXQ03014 270 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 SMN1Q16637 294 aaKnown RBP13.17□□□□□ -0.3
LSS-201ENST00000356396 VMACQ2NL98 169 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 ZFP1Q6P2D0 407 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 SHISA6Q6ZSJ9 500 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 METTL25Q8N6Q8 603 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 CREB3L4Q8TEY5 395 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 ZFP90Q8TF47 636 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 CNRIP1Q96F85 164 aaPredicted RBP13.17□□□□□ -0.3
LSS-201ENST00000356396 PRO3102Q9H379 93 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 SERHL2Q9H4I8 314 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 RUBCNLQ9H714 662 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 TMEM9Q9P0T7 183 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms