RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 PDHA2P29803 388 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 TIA1P31483 386 aaKnown RBP eCLIP12.78□□□□□ -0.366e-6■□□□□ 11.3
NCDN-201ENST00000356090 ATP6V1E1P36543 226 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 MAPK8P45983 427 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 GSTM5P46439 218 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 SLC6A12P48065 614 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 SCN1BQ07699 218 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 PLAG1Q6DJT9 500 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 SYCE2Q6PIF2 218 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 TMIGD1Q6UXZ0 262 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 CEACAM20Q6UY09 585 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 SHFQ7M4L6 423 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 COMMD6Q7Z4G1 85 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 WDR48Q8TAF3 677 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 YME1L1Q96TA2 773 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 OR2B2Q9GZK3 357 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 POLR2J3Q9H1A7 115 aaKnown RBP12.78□□□□□ -0.36
NCDN-201ENST00000356090 CCDC177Q9NQR7 707 aaPredicted RBP12.78□□□□□ -0.36
NCDN-201ENST00000356090 CARD8Q9Y2G2 431 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 DYRK1BQ9Y463 629 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 PATJQ8NI35 1801 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 TRBV5-4A0A0C4DH59 114 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 MANSC4A6NHS7 340 aaPredicted RBP12.78□□□□□ -0.36
NCDN-201ENST00000356090 CYP17A1P05093 508 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 IL7P13232 177 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 SNRPD2P62316 118 aaKnown RBP12.78□□□□□ -0.36
NCDN-201ENST00000356090 ZNF284Q2VY69 593 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 LIPJQ5W064 366 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 FRMPD2BQ6IN97 320 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 PAMR1Q6UXH9 720 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 IFNL1Q8IU54 200 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 SORCS1Q8WY21 1168 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 CASD1Q96PB1 797 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 TTLL2Q9BWV7 592 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 NLNQ9BYT8 704 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 SEMA3GQ9NS98 782 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 STOX2Q9P2F5 926 aaPredicted RBP12.78□□□□□ -0.36
NCDN-201ENST00000356090 PADI2Q9Y2J8 665 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 CTSCP53634 463 aa12.77□□□□□ -0.36
NCDN-201ENST00000356090 EPHB3P54753 998 aa12.77□□□□□ -0.36
NCDN-201ENST00000356090 LSRQ86X29 649 aaPredicted RBP12.77□□□□□ -0.36
NCDN-201ENST00000356090 CFAP206Q8IYR0 622 aa12.77□□□□□ -0.36
NCDN-201ENST00000356090 ZNF740Q8NDX6 193 aa12.77□□□□□ -0.36
NCDN-201ENST00000356090 OR6F1Q8NGZ6 308 aa12.77□□□□□ -0.36
NCDN-201ENST00000356090 KLHL6Q8WZ60 621 aa12.77□□□□□ -0.36
NCDN-201ENST00000356090 MRPS31Q92665 395 aaKnown RBP12.77□□□□□ -0.36
NCDN-201ENST00000356090 TMEM169Q96HH4 297 aa12.77□□□□□ -0.36
NCDN-201ENST00000356090 WRAP53Q9BUR4 548 aaKnown RBP12.77□□□□□ -0.36
NCDN-201ENST00000356090 CWH43Q9H720 699 aa12.77□□□□□ -0.36
NCDN-201ENST00000356090 RABL2BQ9UNT1 228 aa12.77□□□□□ -0.36
NCDN-201ENST00000356090 YARS2Q9Y2Z4 477 aaKnown RBP12.77□□□□□ -0.36
NCDN-201ENST00000356090 PRMT3O60678 531 aa12.77□□□□□ -0.37
NCDN-201ENST00000356090 MRPS14O60783 128 aaKnown RBP12.77□□□□□ -0.37
NCDN-201ENST00000356090 GCM2O75603 506 aaPredicted RBP12.77□□□□□ -0.37
NCDN-201ENST00000356090 PSKH1P11801 424 aa12.77□□□□□ -0.37
NCDN-201ENST00000356090 SPINT3P49223 89 aa12.77□□□□□ -0.37
NCDN-201ENST00000356090 XKP51811 444 aa12.77□□□□□ -0.37
NCDN-201ENST00000356090 ALDH6A1Q02252 535 aaKnown RBP12.77□□□□□ -0.37
NCDN-201ENST00000356090 ZNF763Q0D2J5 394 aa12.77□□□□□ -0.37
NCDN-201ENST00000356090 SSX1Q16384 188 aa12.77□□□□□ -0.37
NCDN-201ENST00000356090 DCST1Q5T197 706 aa12.77□□□□□ -0.37
NCDN-201ENST00000356090 TMEM220Q6QAJ8 160 aa12.77□□□□□ -0.37
NCDN-201ENST00000356090 ADCK2Q7Z695 626 aa12.77□□□□□ -0.37
NCDN-201ENST00000356090 TSEN54Q7Z6J9 526 aaKnown RBP12.77□□□□□ -0.37
NCDN-201ENST00000356090 C19orf18Q8NEA5 215 aa12.77□□□□□ -0.37
NCDN-201ENST00000356090 FAM46DQ8NEK8 389 aa12.77□□□□□ -0.37
NCDN-201ENST00000356090 ZNF461Q8TAF7 563 aa12.77□□□□□ -0.37
NCDN-201ENST00000356090 C9orf43Q8TAL5 461 aaPredicted RBP12.77□□□□□ -0.37
NCDN-201ENST00000356090 REEP4Q9H6H4 257 aa12.77□□□□□ -0.37
NCDN-201ENST00000356090 TEKT2Q9UIF3 430 aa12.77□□□□□ -0.37
NCDN-201ENST00000356090 MYOFQ9NZM1 2061 aa12.77□□□□□ -0.37
NCDN-201ENST00000356090 TRAV19A0A0A6YYK7 116 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 A0A1W2PQL4 384 aaPredicted RBP12.76□□□□□ -0.37
NCDN-201ENST00000356090 NEDD8-MDP1E9PL57 170 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 H3BQ06 376 aaPredicted RBP12.76□□□□□ -0.37
NCDN-201ENST00000356090 SOCS5O75159 536 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 STATHP02808 62 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 ADRA2AP08913 450 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 SRCP12931 536 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 MANFP55145 182 aaKnown RBP12.76□□□□□ -0.37
NCDN-201ENST00000356090 IRF3Q14653 427 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 GGTA1PQ4G0N0 100 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 CRTC2Q53ET0 693 aaPredicted RBP12.76□□□□□ -0.37
NCDN-201ENST00000356090 TRIQKQ629K1 86 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 HIST2H2AA3Q6FI13 130 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 RBM45Q8IUH3 476 aaKnown RBP12.76□□□□□ -0.37
NCDN-201ENST00000356090 XAGE5Q8WWM1 108 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 EXOSC8Q96B26 276 aaKnown RBP12.76□□□□□ -0.37
NCDN-201ENST00000356090 TSSK6Q9BXA6 273 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 LINC00597Q9H2U6 94 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 ACER3Q9NUN7 267 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 TBC1D24Q9ULP9 559 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 PLAGL1Q9UM63 463 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 PLD2O14939 933 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 HOXC11O43248 304 aaPredicted RBP12.76□□□□□ -0.37
NCDN-201ENST00000356090 IL3P08700 152 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 C1SP09871 688 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 QPRTQ15274 297 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 TRIM71Q2Q1W2 868 aaKnown RBP12.76□□□□□ -0.37
NCDN-201ENST00000356090 ATAT1Q5SQI0 421 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms