RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 KCTD13Q8WZ19 329 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 TMEM184CQ9NVA4 438 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 COPZ2Q9P299 210 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 PCDH10Q9P2E7 1040 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 WDR45Q9Y484 360 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 MAGED1Q9Y5V3 778 aaPredicted RBP16.65■□□□□ 0.26
COL27A1-201ENST00000356083 CEMIPQ8WUJ3 1361 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 PDLIM1O00151 329 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 XRCC1P18887 633 aaPredicted RBP16.65■□□□□ 0.26
COL27A1-201ENST00000356083 DGKQP52824 942 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 MEF2AQ02078 507 aaPredicted RBP16.65■□□□□ 0.26
COL27A1-201ENST00000356083 DLX2Q07687 328 aaPredicted RBP16.65■□□□□ 0.26
COL27A1-201ENST00000356083 TSTD2Q5T7W7 516 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 ADGRD2Q7Z7M1 963 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 TRIM74Q86UV6 250 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 GLYATL1Q969I3 302 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 PIP5K1AQ99755 562 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 OR51B5Q9H339 312 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 LRFN1Q9P244 771 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 ECI2O75521 394 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 DIRAS3O95661 229 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 SYPP08247 313 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 IL10RBQ08334 325 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 PAQR3Q6TCH7 311 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 METTL2AQ96IZ6 378 aaKnown RBP16.65■□□□□ 0.26
COL27A1-201ENST00000356083 ABOP16442 354 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 SWT1Q5T5J6 900 aaKnown RBP16.65■□□□□ 0.26
COL27A1-201ENST00000356083 THOC6Q86W42 341 aaKnown RBP16.65■□□□□ 0.26
COL27A1-201ENST00000356083 PLD5Q8N7P1 536 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 OR14L1PQ8NHC6 308 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 TMEM234Q8WY98 164 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 ZNF514Q96K75 400 aaPredicted RBP16.65■□□□□ 0.26
COL27A1-201ENST00000356083 OR4D2P58180 307 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 CENPNQ96H22 339 aaPredicted RBP16.65■□□□□ 0.26
COL27A1-201ENST00000356083 ACBD6Q9BR61 282 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 DHDHQ9UQ10 334 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 DERAQ9Y315 318 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 HMX3A6NHT5 357 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 NRP1O14786 923 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 GKP32189 559 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 MAGEA8P43361 318 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 GABRA2P47869 451 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 CD97P48960 835 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 IDH3AP50213 366 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 LRRC19Q9H756 370 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 TIMMDC1Q9NPL8 285 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 EDARQ9UNE0 448 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 GPIP06744 558 aa16.64■□□□□ 0.26
COL27A1-201ENST00000356083 NAA10P41227 235 aaPredicted RBP16.64■□□□□ 0.26
COL27A1-201ENST00000356083 RNF4P78317 190 aa16.64■□□□□ 0.26
COL27A1-201ENST00000356083 ST3GAL3Q11203 375 aa16.64■□□□□ 0.26
COL27A1-201ENST00000356083 WDR20Q8TBZ3 569 aa16.64■□□□□ 0.26
COL27A1-201ENST00000356083 C7orf50Q9BRJ6 194 aaKnown RBP16.64■□□□□ 0.26
COL27A1-201ENST00000356083 ACSS3Q9H6R3 686 aa16.64■□□□□ 0.26
COL27A1-201ENST00000356083 ZDHHC3Q9NYG2 299 aa16.64■□□□□ 0.26
COL27A1-201ENST00000356083 NLGN3Q9NZ94 848 aa16.64■□□□□ 0.26
COL27A1-201ENST00000356083 TP53I11O14683 189 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 DNAJA2O60884 412 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 KLF8O95600 359 aaPredicted RBP16.64■□□□□ 0.25
COL27A1-201ENST00000356083 EOMESO95936 686 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 CDH1P12830 882 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 ATPAF1Q5TC12 328 aaPredicted RBP16.64■□□□□ 0.25
COL27A1-201ENST00000356083 PIM3Q86V86 326 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 C12orf45Q8N5I9 185 aaPredicted RBP16.64■□□□□ 0.25
COL27A1-201ENST00000356083 AENQ8WTP8 325 aaKnown RBP16.64■□□□□ 0.25
COL27A1-201ENST00000356083 TLL2Q9Y6L7 1015 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 DPP6P42658 865 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 CX3CR1P49238 355 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 ERVK-16P61578 105 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 LAPTM4AQ15012 233 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 LILRB2Q8N423 598 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 DIO2Q92813 273 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 PTERQ96BW5 349 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 PGM2Q96G03 612 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 MND1Q9BWT6 205 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 TMEM44Q2T9K0 475 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 HOXB13Q92826 284 aaPredicted RBP16.64■□□□□ 0.25
COL27A1-201ENST00000356083 RDH12Q96NR8 316 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 AKAP6Q13023 2319 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 JUNDP17535 347 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 DLSTP36957 453 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 ACADVLP49748 655 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 NPTX1Q15818 432 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 CXorf21Q9HAI6 301 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 GNB4Q9HAV0 340 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 TULP4Q9NRJ4 1543 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 DOCK10Q96BY6 2186 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 COL1A2P08123 1366 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 CYP3A7-CYP3A51PA0A087WV96 503 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 AGAP5A6NIR3 686 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 CYP3A7P24462 503 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 RRAS2P62070 204 aaPredicted RBP16.64■□□□□ 0.25
COL27A1-201ENST00000356083 TSSK6Q9BXA6 273 aa16.64■□□□□ 0.25
COL27A1-201ENST00000356083 A0A087WUU8 490 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 GDF5P43026 501 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 TSFMP43897 325 aaKnown RBP16.63■□□□□ 0.25
COL27A1-201ENST00000356083 HABP2Q14520 560 aaPredicted RBP16.63■□□□□ 0.25
COL27A1-201ENST00000356083 SPOCK2Q92563 424 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 KCNN1Q92952 543 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 MALSU1Q96EH3 234 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms