RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 FAM58BPP0C7Q3 252 aa14.67□□□□□ -0.06
TRIM13-201ENST00000356017 TPP2P29144 1249 aaPredicted RBP14.67□□□□□ -0.06
TRIM13-201ENST00000356017 BUD31P41223 144 aaPredicted RBP14.67□□□□□ -0.06
TRIM13-201ENST00000356017 FOLR3P41439 243 aa14.67□□□□□ -0.06
TRIM13-201ENST00000356017 MAPK12P53778 367 aa14.67□□□□□ -0.06
TRIM13-201ENST00000356017 TRA2BP62995 288 aaKnown RBP14.67□□□□□ -0.06
TRIM13-201ENST00000356017 TUBB8Q3ZCM7 444 aa14.67□□□□□ -0.06
TRIM13-201ENST00000356017 ATP6AP1LQ52LC2 224 aa14.67□□□□□ -0.06
TRIM13-201ENST00000356017 BROXQ5VW32 411 aa14.67□□□□□ -0.06
TRIM13-201ENST00000356017 MRM1Q6IN84 353 aaKnown RBP14.67□□□□□ -0.06
TRIM13-201ENST00000356017 ZC3H7AQ8IWR0 971 aaKnown RBP14.67□□□□□ -0.06
TRIM13-201ENST00000356017 LRRC34Q8IZ02 419 aa14.67□□□□□ -0.06
TRIM13-201ENST00000356017 OR2T11Q8NH01 316 aa14.67□□□□□ -0.06
TRIM13-201ENST00000356017 NACC2Q96BF6 587 aa14.67□□□□□ -0.06
TRIM13-201ENST00000356017 TUBGCP3Q96CW5 907 aa14.67□□□□□ -0.06
TRIM13-201ENST00000356017 SLC45A3Q96JT2 553 aa14.67□□□□□ -0.06
TRIM13-201ENST00000356017 SPSB2Q99619 263 aa14.67□□□□□ -0.06
TRIM13-201ENST00000356017 NUF2Q9BZD4 464 aa14.67□□□□□ -0.06
TRIM13-201ENST00000356017 ACTL8Q9H568 366 aa14.67□□□□□ -0.06
TRIM13-201ENST00000356017 MEAF6Q9HAF1 191 aa14.67□□□□□ -0.06
TRIM13-201ENST00000356017 KCMF1Q9P0J7 381 aa14.67□□□□□ -0.06
TRIM13-201ENST00000356017 SSUH2Q9Y2M2 353 aa14.67□□□□□ -0.06
TRIM13-201ENST00000356017 RAXQ9Y2V3 346 aa14.67□□□□□ -0.06
TRIM13-201ENST00000356017 PTRH2Q9Y3E5 179 aaKnown RBP14.67□□□□□ -0.06
TRIM13-201ENST00000356017 ATP6AP2A0A1C7CYW4 349 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 GNG14A0A1W2PPG7 69 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 TCP11X1B4DZS4 312 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 CLDN4O14493 209 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 PCDH7O60245 1069 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 DNAJB6O75190 326 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 ATP6AP2O75787 350 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 GBAP04062 536 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 CPN2P22792 545 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 F8A1P23610 371 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 TIA1P31483 386 aaKnown RBP eCLIP14.66□□□□□ -0.06
TRIM13-201ENST00000356017 MC1RQ01726 317 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 KLC1Q07866 573 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 SSPNQ14714 243 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 FAM47EQ6ZV65 393 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 VASH2Q86V25 355 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 SPACA3Q8IXA5 215 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 C7orf57Q8NEG2 295 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 C3orf30Q96M34 536 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 DCBLD2Q96PD2 775 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 MAPKAP1Q9BPZ7 522 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 WDR41Q9HAD4 459 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 FBXW2Q9UKT8 454 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 AKAP13Q12802 2813 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 ASPMQ8IZT6 3477 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 SEC16AO15027 2179 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 FREM2Q5SZK8 3169 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 A0A087WV48 116 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 CYR61O00622 381 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 PCDH17O14917 1159 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 PROM1O43490 865 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 TMPRSS11DO60235 418 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 CNOT3O75175 753 aaKnown RBP14.66□□□□□ -0.06
TRIM13-201ENST00000356017 PEX11AO75192 247 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 CREG1O75629 220 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 TGDSO95455 350 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 IGHEP01854 428 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 JUNP05412 331 aaKnown RBP14.66□□□□□ -0.06
TRIM13-201ENST00000356017 ANXA4P09525 319 aaPredicted RBP14.66□□□□□ -0.06
TRIM13-201ENST00000356017 UCNP55089 124 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 MAD2L1Q13257 205 aaPredicted RBP14.66□□□□□ -0.06
TRIM13-201ENST00000356017 KIAA0040Q15053 153 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 SMU1Q2TAY7 513 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 GALNTL6Q49A17 601 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 MINDY4Q4G0A6 757 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 MFSD4BQ5TF39 518 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 NOXRED1Q6NXP6 359 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 PARP9Q8IXQ6 854 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 ZNF595Q8IYB9 648 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 EFCAB3Q8N7B9 438 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 ZSCAN1Q8NBB4 408 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 STARD8Q92502 1023 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 CRB3Q9BUF7 120 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 SOX17Q9H6I2 414 aaPredicted RBP14.66□□□□□ -0.06
TRIM13-201ENST00000356017 SEMA3GQ9NS98 782 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 IL17BQ9UHF5 180 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 MKL2Q9ULH7 1088 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 WBP11Q9Y2W2 641 aaKnown RBP14.66□□□□□ -0.06
TRIM13-201ENST00000356017 ATG4BQ9Y4P1 393 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 ASB4Q9Y574 426 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 AHCTF1Q8WYP5 2266 aa14.66□□□□□ -0.06
TRIM13-201ENST00000356017 IDSB3KWA1 339 aa14.65□□□□□ -0.06
TRIM13-201ENST00000356017 EDF1O60869 148 aaKnown RBP14.65□□□□□ -0.06
TRIM13-201ENST00000356017 HEXBP07686 556 aa14.65□□□□□ -0.06
TRIM13-201ENST00000356017 ACPPP15309 386 aa14.65□□□□□ -0.06
TRIM13-201ENST00000356017 MAPK1P28482 360 aa14.65□□□□□ -0.06
TRIM13-201ENST00000356017 EMP2P54851 167 aa14.65□□□□□ -0.06
TRIM13-201ENST00000356017 HSD17B7P56937 341 aa14.65□□□□□ -0.06
TRIM13-201ENST00000356017 ZNF763Q0D2J5 394 aa14.65□□□□□ -0.06
TRIM13-201ENST00000356017 RFTN2Q52LD8 501 aaPredicted RBP14.65□□□□□ -0.06
TRIM13-201ENST00000356017 CRTC2Q53ET0 693 aaPredicted RBP14.65□□□□□ -0.06
TRIM13-201ENST00000356017 C6orf136Q5SQH8 315 aa14.65□□□□□ -0.06
TRIM13-201ENST00000356017 PRSS58Q8IYP2 241 aa14.65□□□□□ -0.06
TRIM13-201ENST00000356017 FNDC5Q8NAU1 212 aa14.65□□□□□ -0.06
TRIM13-201ENST00000356017 PPP1R36Q96LQ0 422 aa14.65□□□□□ -0.06
TRIM13-201ENST00000356017 FAIM2Q9BWQ8 316 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms