RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 METTL11BQ5VVY1 283 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 ZFP90Q8TF47 636 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 FUBP3Q96I24 572 aaKnown RBP eCLIP12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 NSUN3Q9H649 340 aaKnown RBP12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 INTS6Q9UL03 887 aaKnown RBP12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 A0A0G2JMP0 313 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 TGM6O95932 706 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 PCCBP05166 539 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 DHRS4L1P0CG22 281 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 POU4F2Q12837 409 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 ENPP2Q13822 863 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 MTFR2Q6P444 385 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 SIMC1Q8NDZ2 872 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 C7orf57Q8NEG2 295 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 OR4M2Q8NGB6 313 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 WRAP53Q9BUR4 548 aaKnown RBP12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 TRMT61BQ9BVS5 477 aaKnown RBP12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 TTC34A8MYJ7 566 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 H7C417 338 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 CD1DP15813 335 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 CXCR1P25024 350 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 NIPAL4Q0D2K0 466 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 PTCHD3Q3KNS1 767 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 FAM122CQ6P4D5 195 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 ARL14Q8N4G2 192 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 PEX13Q92968 403 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 CIDECQ96AQ7 238 aaPredicted RBP12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 GPR83Q9NYM4 423 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 LAMP5Q9UJQ1 280 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 MEIOCA2RUB1 952 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 SC5DO75845 299 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 PPM1AP35813 382 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 GDF5P43026 501 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 CDK5R2Q13319 367 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 GNMTQ14749 295 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 SLC36A3Q495N2 470 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 C2orf15Q8WU43 125 aaKnown RBP12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 MOAP1Q96BY2 351 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 PEBP4Q96S96 227 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 RIOK2Q9BVS4 552 aaKnown RBP12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 J3KR12 359 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 OAZ2O95190 189 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 IFNA1P01562 189 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 SLC35E2BP0CK96 405 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 THEGLP0DJG4 465 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 NRG3P56975 720 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 GALNT1Q10472 559 aaPredicted RBP12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 SPARTQ8N0X7 666 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 PTERQ96BW5 349 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 RANBP9Q96S59 729 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 NLE1Q9NVX2 485 aaPredicted RBP12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 TMEM45AQ9NWC5 275 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 WRAP73Q9P2S5 460 aaPredicted RBP12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 COPS7AQ9UBW8 275 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 PCDHB11Q9Y5F2 797 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 CAPN14A8MX76 684 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 MS4A2Q01362 244 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 ELP2Q6IA86 826 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 AMZ2Q86W34 360 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 ADAMTS19Q8TE59 1207 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 TRIB3Q96RU7 358 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 PRRG4Q9BZD6 226 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 EVA1BQ9NVM1 165 aa12.25□□□□□ -0.45
SYNCRIP-201ENST00000355238 E7EQ34 232 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 COQ9O75208 318 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 JUNP05412 331 aaKnown RBP12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 OLIG2Q13516 323 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 SPIN3Q5JUX0 258 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 NOXRED1Q6NXP6 359 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 PIWIL3Q7Z3Z3 882 aaKnown RBP12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 TICAM1Q8IUC6 712 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 MS4A15Q8N5U1 240 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 OR6Q1Q8NGQ2 317 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 UTP4Q969X6 686 aaKnown RBP12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 ACDQ96AP0 544 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 TESCQ96BS2 214 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 ELMOD3Q96FG2 381 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 FCRL3Q96P31 734 aaPredicted RBP12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 NPAP1Q9NZP6 1156 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 ACSL5Q9ULC5 683 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 TBC1D3DA0A087WVF3 549 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 TBC1D3IA0A087WXS9 549 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 TBC1D3EA0A087X179 549 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 TBC1D3KA0A087X1G2 549 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 TBC1D3FA6NER0 549 aaPredicted RBP12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 TBC1D3LB9A6J9 549 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 WASH3PC4AMC7 463 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 NME4O00746 187 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 TBC1D3HP0C7X1 549 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 FRKP42685 505 aaPredicted RBP12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 HERV-K104P61576 105 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 CHRNA6Q15825 494 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 TBC1D3GQ6DHY5 549 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 TBC1D3CQ6IPX1 549 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 TBC1D3Q8IZP1 549 aaPredicted RBP12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 OR10A4Q9H209 315 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 ERVW-1Q9UQF0 538 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 CD8B2A6NJW9 211 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 VILLO15195 856 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 CD8BP10966 210 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms