RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 YIPF6Q96EC8 236 aa3.56□□□□□ -1.84
RNF38-203ENST00000353739 KCNC2Q96PR1 638 aa3.56□□□□□ -1.84
RNF38-203ENST00000353739 DUSP21Q9H596 190 aa3.56□□□□□ -1.84
RNF38-203ENST00000353739 MRPS30Q9NP92 439 aaKnown RBP3.56□□□□□ -1.84
RNF38-203ENST00000353739 CRNNQ9UBG3 495 aaPredicted RBP3.56□□□□□ -1.84
RNF38-203ENST00000353739 SEC14L4Q9UDX3 406 aa3.56□□□□□ -1.84
RNF38-203ENST00000353739 PHF11Q9UIL8 331 aa3.56□□□□□ -1.84
RNF38-203ENST00000353739 CHD9Q3L8U1 2897 aa3.56□□□□□ -1.84
RNF38-203ENST00000353739 MYOCOSA0A1B0GUC4 107 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 PNMA8CA0A1B0GUJ8 204 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 ISPDA4D126 451 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 CLDN25C9JDP6 229 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 TAF4O00268 1085 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 UGT2B17O75795 530 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 PCDH8O95206 1070 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 SOD1P00441 154 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 MT-ND1P03886 318 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 RPLP0P05388 317 aaKnown RBP3.55□□□□□ -1.84
RNF38-203ENST00000353739 IL7RP16871 459 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 PCMT1P22061 227 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 SOX11P35716 441 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 CAPZA2P47755 286 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 RAB28P51157 221 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 HMGA2P52926 109 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 PLA2G16P53816 162 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 PRR5P85299 388 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 SEMG2Q02383 582 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 COX10Q12887 443 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 NKG7Q16617 165 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 EIPR1Q53HC9 387 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 ZNF648Q5T619 568 aaPredicted RBP3.55□□□□□ -1.84
RNF38-203ENST00000353739 ATAD3BQ5T9A4 648 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 DEPDC1Q5TB30 811 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 XAF1Q6GPH4 301 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 ANKRD26P1Q6NSI1 321 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 CASP12Q6UXS9 341 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 GET4Q7L5D6 327 aaPredicted RBP3.55□□□□□ -1.84
RNF38-203ENST00000353739 HEATR4Q86WZ0 1026 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 LGI4Q8N135 537 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 STX19Q8N4C7 294 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 TOR1AIP2Q8NFQ8 470 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 SUN3Q8TAQ9 357 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.55□□□□□ -1.841e-9■■■■■ 40
RNF38-203ENST00000353739 ZFPM2Q8WW38 1151 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 TMIGD2Q96BF3 282 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 ZNF354BQ96LW1 612 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 FAM129BQ96TA1 746 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 PINK1Q9BXM7 581 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 DGCR6LQ9BY27 220 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 ARMC7Q9H6L4 198 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 FKBP14Q9NWM8 211 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 KLHL28Q9NXS3 571 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 TAS2R7Q9NYW3 318 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 MKLN1Q9UL63 735 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 LIPT1Q9Y234 373 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 KLHL20Q9Y2M5 609 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 PCDHGB5Q9Y5G0 923 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 LYVE1Q9Y5Y7 322 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 FAM221BA6H8Z2 402 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 CLCA1A8K7I4 914 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 SPINT1O43278 529 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 PLRG1O43660 514 aaKnown RBP3.55□□□□□ -1.84
RNF38-203ENST00000353739 CDK1P06493 297 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 PDHA2P29803 388 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 S100A5P33763 92 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 SNRPGP62308 76 aaKnown RBP3.55□□□□□ -1.84
RNF38-203ENST00000353739 RPP38P78345 283 aaKnown RBP3.55□□□□□ -1.84
RNF38-203ENST00000353739 SLC35A2P78381 396 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 RAPSNQ13702 412 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 ENPP2Q13822 863 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 SLC9A5Q14940 896 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 CLCA4Q14CN2 919 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 ZSWIM7Q19AV6 140 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 CATSPEREQ5SY80 951 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 DCST1Q5T197 706 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 GTF2IRD2BQ6EKJ0 949 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.55□□□□□ -1.84
RNF38-203ENST00000353739 GDPGP1Q6ZNW5 385 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 USP30Q70CQ3 517 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 GTF2IRD2Q86UP8 949 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 RNF130Q86XS8 419 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 AMER2Q8N7J2 671 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 FAM86B1Q8N7N1 296 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 TBC1D15Q8TC07 691 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 SLC38A4Q969I6 547 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 NXPE3Q969Y0 559 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 C7orf34Q96L11 122 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 ZSWIM3Q96MP5 696 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 BBS4Q96RK4 519 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 SARGQ9BW04 601 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 FUNDC2Q9BWH2 189 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 UCK2Q9BZX2 261 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 MMP27Q9H306 513 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 DDX31Q9H8H2 851 aaKnown RBP3.55□□□□□ -1.84
RNF38-203ENST00000353739 FAIMQ9NVQ4 179 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 WBP1LQ9NX94 342 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 TAC3Q9UHF0 121 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 MSRAQ9UJ68 235 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 FBXL21Q9UKT6 434 aa3.55□□□□□ -1.84
RNF38-203ENST00000353739 COQ6Q9Y2Z9 468 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms