RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 CDK3Q00526 305 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 DMPKQ09013 629 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 ABRQ12979 859 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 NAE1Q13564 534 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 MAP7Q14244 749 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 PTGR1Q14914 329 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 ARHGAP19Q14CB8 494 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 GRAMD1BQ3KR37 738 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 XKR6Q5GH73 641 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 RABL3Q5HYI8 236 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 LPCAT4Q643R3 524 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 ATG9BQ674R7 924 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 KIAA1161Q6NSJ0 714 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 PNCKQ6P2M8 343 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 SLC2A7Q6PXP3 512 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 SLITRK4Q8IW52 837 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 RIMKLAQ8IXN7 391 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 LRRC56Q8IYG6 542 aaPredicted RBP7.84□□□□□ -1.15
CD44-205ENST00000352818 ADGRG5Q8IZF4 528 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 ZNF295-AS1Q8N0V1 137 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 IL22RA1Q8N6P7 574 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 PACRGLQ8N7B6 248 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 PAPD5Q8NDF8 572 aaKnown RBP7.84□□□□□ -1.15
CD44-205ENST00000352818 TNIP2Q8NFZ5 429 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 OR9A1PQ8NGU1 263 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 SPATA3Q8NHX4 192 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 FAM174AQ8TBP5 190 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 GPBAR1Q8TDU6 330 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 ZNF480Q8WV37 535 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 GTF2H4Q92759 462 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 SLCO4A1Q96BD0 722 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 PYCR2Q96C36 320 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 C11orf24Q96F05 449 aaPredicted RBP7.84□□□□□ -1.15
CD44-205ENST00000352818 BMFQ96LC9 184 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 TMEM74Q96NL1 305 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 OR4K3Q96R72 315 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 SH3GL1Q99961 368 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 EFCAB11Q9BUY7 163 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 TRIM8Q9BZR9 551 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 ATG10Q9H0Y0 220 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 GSX1Q9H4S2 264 aaPredicted RBP7.84□□□□□ -1.15
CD44-205ENST00000352818 Q9H521 79 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 RMND5AQ9H871 391 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 COPS7BQ9H9Q2 264 aaPredicted RBP7.84□□□□□ -1.15
CD44-205ENST00000352818 IL1RL2Q9HB29 575 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 INTS7Q9NVH2 962 aaKnown RBP7.84□□□□□ -1.15
CD44-205ENST00000352818 SIRT5Q9NXA8 310 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 SPATA7Q9P0W8 599 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 PADI4Q9UM07 663 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 PCDHGA11Q9Y5H2 935 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 RTTNQ86VV8 2226 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 LOC101059948A0A1B0GTJ6 334 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 ZNF839A8K0R7 811 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 E7EQ34 232 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 FOXE1O00358 373 aaPredicted RBP7.83□□□□□ -1.16
CD44-205ENST00000352818 KMOO15229 486 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 PRICKLE3O43900 615 aaPredicted RBP7.83□□□□□ -1.16
CD44-205ENST00000352818 POP7O75817 140 aaKnown RBP7.83□□□□□ -1.16
CD44-205ENST00000352818 RPN2P04844 631 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 CELA2BP08218 269 aaPredicted RBP7.83□□□□□ -1.16
CD44-205ENST00000352818 FURINP09958 794 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 SDC1P18827 310 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 PRPS1L1P21108 318 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 KELP23276 732 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 S100A3P33764 101 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 TRIM23P36406 574 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 HSD17B2P37059 387 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 GRIA3P42263 894 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 ASMTP46597 345 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 DGKQP52824 942 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 TBPL1P62380 186 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 EIF2B5Q13144 721 aaKnown RBP7.83□□□□□ -1.16
CD44-205ENST00000352818 LAPTM5Q13571 262 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 DOC2AQ14183 400 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 FGL2Q14314 439 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 MAPKAPK3Q16644 382 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 WSCD2Q2TBF2 565 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 FAM174BQ3ZCQ3 159 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 CCSMST1Q4G0I0 132 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 SPIN4Q56A73 249 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 SGO1Q5FBB7 561 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 PAGE2BQ5JRK9 111 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 SPANXN4Q5MJ08 99 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 NOXRED1Q6NXP6 359 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 LCTLQ6UWM7 567 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 CYP2R1Q6VVX0 501 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 SLCO4C1Q6ZQN7 724 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 Q6ZSR6 202 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 GDF7Q7Z4P5 450 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 CAMKMTQ7Z624 323 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 TRIM74Q86UV6 250 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 LRRTM4Q86VH4 590 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 PRIMA1Q86XR5 153 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 DCUN1D3Q8IWE4 304 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 LAS2Q8IYD9 372 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 CFAP206Q8IYR0 622 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 MARVELD2Q8N4S9 558 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 PLA2G15Q8NCC3 412 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 PHC3Q8NDX5 983 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 DNAJB14Q8TBM8 379 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms