RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 CXorf36Q9H7Y0 433 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 CREBZFQ9NS37 354 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 WNT6Q9Y6F9 365 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 USP34Q70CQ2 3546 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 WWP2O00308 870 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 ARHGAP33O14559 1287 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 ZNF197O14709 1029 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 GPX5O75715 221 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 CCNB2O95067 398 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 C1GALT1C1LP0DN25 315 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 CBLP22681 906 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 S100A5P33763 92 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 LIMS1P48059 325 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 UGT2B15P54855 530 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 TLE2Q04725 743 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 CDC20Q12834 499 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 SSX1Q16384 188 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 DEPDC1Q5TB30 811 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 FRMPD2BQ6IN97 320 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 MRGPRX3Q96LB0 322 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 FOPNLQ96NB1 174 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 DEFB118Q96PH6 123 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 VPS35Q96QK1 796 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 NXF2Q9GZY0 626 aaKnown RBP17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 TAF4O00268 1085 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 ENTPD6O75354 484 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 CYP7B1O75881 506 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 OXSR1O95747 527 aaPredicted RBP17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 ELFN1P0C7U0 828 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 SOX3P41225 446 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 TAP2Q03519 686 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 TEAD2Q15562 447 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 OLIG3Q7RTU3 272 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 ATCAYQ86WG3 371 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 TRAPPC5Q8IUR0 188 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 CELF5Q8N6W0 485 aaKnown RBP17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 WDR36Q8NI36 951 aaKnown RBP17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 ZNF689Q96CS4 500 aaPredicted RBP17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 SDHCQ99643 169 aaPredicted RBP17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 MARCH7Q9H992 704 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 SLAMF7Q9NQ25 335 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 TAAR2Q9P1P5 351 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 ATP11BQ9Y2G3 1177 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 TSC22D4Q9Y3Q8 395 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 PCYT1BQ9Y5K3 369 aaPredicted RBP17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 CCDC88CQ9P219 2028 aa17.27■□□□□ 0.36
PTP4A3-202ENST00000349124 WASH3PC4AMC7 463 aa17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 KMOO15229 486 aa17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 DCDC1P59894 354 aa17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 MESP2Q0VG99 397 aa17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 SEC23BQ15437 767 aa17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 ZNF181Q2M3W8 571 aa17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 PNCKQ6P2M8 343 aa17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 TRIM40Q6P9F5 258 aa17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 CCBE1Q6UXH8 406 aaPredicted RBP17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 HMGN2P46Q86SG4 172 aa17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 DEPDC4Q8N2C3 294 aa17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 ST13P5Q8NFI4 369 aaPredicted RBP17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 UCN3Q969E3 161 aa17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 CNPPD1Q9BV87 410 aa17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 SP140LQ9H930 580 aa17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 CPNE5Q9HCH3 593 aa17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 THSD1Q9NS62 852 aa17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 PCDHGB6Q9Y5F9 930 aa17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 SNX11Q9Y5W9 270 aa17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 ENPP4Q9Y6X5 453 aa17.27■□□□□ 0.35
PTP4A3-202ENST00000349124 PCBP3P57721 371 aaKnown RBP17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 SF3B4Q15427 424 aaKnown RBP eCLIP17.26■□□□□ 0.354e-7■■■■■ 27.4
PTP4A3-202ENST00000349124 CRB2Q5IJ48 1285 aa17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 TRMT11Q7Z4G4 463 aaKnown RBP17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 VN1R5Q7Z5H4 357 aa17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 GEMIN6Q8WXD5 167 aaKnown RBP17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 METTL2AQ96IZ6 378 aaKnown RBP17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 TMEM38AQ9H6F2 299 aa17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 EXOSC4Q9NPD3 245 aaKnown RBP17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 DNAJC27Q9NZQ0 273 aa17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 FTSJ1Q9UET6 329 aa17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 COL4A6Q14031 1691 aa17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 CHRM5P08912 532 aaPredicted RBP17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 CRISP1P54107 249 aa17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 LSM11P83369 360 aaKnown RBP eCLIP17.26■□□□□ 0.356e-6■■□□□ 14.5
PTP4A3-202ENST00000349124 FCHO2Q0JRZ9 810 aa17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 PDE7AQ13946 482 aa17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 LRIT3Q3SXY7 679 aa17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 HORMAD2Q8N7B1 307 aa17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 KBTBD8Q8NFY9 601 aa17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 TIFAQ96CG3 184 aa17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 SPHK2Q9NRA0 654 aa17.26■□□□□ 0.35
PTP4A3-202ENST00000349124 ISPDA4D126 451 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 PSMD11O00231 422 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 RFXAPO00287 272 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 KPNA3O00505 521 aaPredicted RBP17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 POLR2EP19388 210 aaKnown RBP17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 HMGA2P52926 109 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 CDC42P60953 191 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 TRIM60Q495X7 471 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 PAQR6Q6TCH4 344 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 CEACAM20Q6UY09 585 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 NLRP8Q86W28 1048 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 OXR1Q8N573 874 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms