RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 PRDM7Q9NQW5 492 aa12.42□□□□□ -0.42
CLCC1-202ENST00000348264 PNO1Q9NRX1 252 aaKnown RBP12.42□□□□□ -0.42
CLCC1-202ENST00000348264 MTRF1LQ9UGC7 380 aaKnown RBP12.42□□□□□ -0.42
CLCC1-202ENST00000348264 ZNF223Q9UK11 482 aaPredicted RBP12.42□□□□□ -0.42
CLCC1-202ENST00000348264 PCDHGB6Q9Y5F9 930 aa12.42□□□□□ -0.42
CLCC1-202ENST00000348264 DNAJC13O75165 2243 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 ZNF407Q9C0G0 2248 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 TRBV11-1A0A0K0K1C0 115 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 MYOCOSA0A1B0GUC4 107 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 SYCE1LA8MT33 242 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 UNC5CO95185 931 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 KLHL2O95198 593 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 MYBL2P10244 700 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 GFAPP14136 432 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 COL8A1P27658 744 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 TGM3Q08188 693 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 SLC13A2Q13183 592 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 HIST2H2ACQ16777 129 aaPredicted RBP12.41□□□□□ -0.42
CLCC1-202ENST00000348264 PFKFB4Q16877 469 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 HIST2H2AA3Q6FI13 130 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 GRHL2Q6ISB3 625 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 MED27Q6P2C8 311 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 MAMDC2Q7Z304 686 aaPredicted RBP12.41□□□□□ -0.42
CLCC1-202ENST00000348264 FJX1Q86VR8 437 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 ZNF227Q86WZ6 799 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 ZNF595Q8IYB9 648 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 PLD6Q8N2A8 252 aaKnown RBP12.41□□□□□ -0.42
CLCC1-202ENST00000348264 ARMC10Q8N2F6 343 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 TEX9Q8N6V9 391 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 OR7G3Q8NG95 312 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 THAP3Q8WTV1 239 aaPredicted RBP12.41□□□□□ -0.42
CLCC1-202ENST00000348264 SLC44A1Q8WWI5 657 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 IFT81Q8WYA0 676 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 NCLNQ969V3 563 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 FRMD6Q96NE9 622 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 KCNC2Q96PR1 638 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 FMO2Q99518 471 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 MAPKAP1Q9BPZ7 522 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 DEFB126Q9BYW3 111 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 KCMF1Q9P0J7 381 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 LRFN1Q9P244 771 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 PPIEQ9UNP9 301 aaKnown RBP12.41□□□□□ -0.42
CLCC1-202ENST00000348264 MRPS33Q9Y291 106 aaKnown RBP12.41□□□□□ -0.42
CLCC1-202ENST00000348264 EML6Q6ZMW3 1958 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 CACNA1CQ13936 2221 aa12.41□□□□□ -0.42
CLCC1-202ENST00000348264 ASPDHA6ND91 283 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 SAP18O00422 153 aaKnown RBP12.4□□□□□ -0.42
CLCC1-202ENST00000348264 CLDN4O14493 209 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 KLK8O60259 260 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 PRKNO60260 465 aaPredicted RBP12.4□□□□□ -0.42
CLCC1-202ENST00000348264 ZG16O60844 167 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 SLC25A12O75746 678 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 SCELO95171 688 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 TGFB1P01137 390 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 CTAGE8P0CG41 777 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 CD46P15529 392 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 EPB42P16452 691 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 ATP5A1P25705 553 aaKnown RBP12.4□□□□□ -0.42
CLCC1-202ENST00000348264 TYK2P29597 1187 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 EEF1DP29692 281 aaKnown RBP12.4□□□□□ -0.42
CLCC1-202ENST00000348264 MAGEA12P43365 314 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 CLCN2P51788 898 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 GPR143P51810 404 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 ALDH18A1P54886 795 aaKnown RBP12.4□□□□□ -0.42
CLCC1-202ENST00000348264 DDX39BQ13838 428 aaKnown RBP12.4□□□□□ -0.42
CLCC1-202ENST00000348264 ACAP2Q15057 778 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 TECRLQ5HYJ1 363 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 CEP128Q6ZU80 1094 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 GALNTL5Q7Z4T8 443 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 CTAGE4Q8IX94 777 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 ACOT4Q8N9L9 421 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 TMEM178AQ8NBL3 297 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 MNS1Q8NEH6 495 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 HUS1BQ8NHY5 278 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 UBE2E3Q969T4 207 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 ISL2Q96A47 359 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 PAFAH2Q99487 392 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 TBCDQ9BTW9 1192 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 SORBS1Q9BX66 1292 aaKnown RBP12.4□□□□□ -0.42
CLCC1-202ENST00000348264 TSPAN10Q9H1Z9 355 aaPredicted RBP12.4□□□□□ -0.42
CLCC1-202ENST00000348264 VPS11Q9H270 941 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 OR51B5Q9H339 312 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 LYRM4Q9HD34 91 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 PRM3Q9NNZ6 103 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 ADAP2Q9NPF8 381 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 ZNF358Q9NW07 568 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 CPSF2Q9P2I0 782 aaKnown RBP12.4□□□□□ -0.42
CLCC1-202ENST00000348264 SEC14L3Q9UDX4 400 aa12.4□□□□□ -0.42
CLCC1-202ENST00000348264 NCOA6Q14686 2063 aaPredicted RBP12.4□□□□□ -0.42
CLCC1-202ENST00000348264 PKDREJQ9NTG1 2253 aa12.39□□□□□ -0.43
CLCC1-202ENST00000348264 CCDC189A1A4V9 331 aa12.39□□□□□ -0.43
CLCC1-202ENST00000348264 NME2P1O60361 137 aa12.39□□□□□ -0.43
CLCC1-202ENST00000348264 LDB3O75112 727 aa12.39□□□□□ -0.43
CLCC1-202ENST00000348264 SIX3O95343 332 aaPredicted RBP12.39□□□□□ -0.43
CLCC1-202ENST00000348264 SP1P08047 785 aa12.39□□□□□ -0.43
CLCC1-202ENST00000348264 INHBAP08476 426 aa12.39□□□□□ -0.43
CLCC1-202ENST00000348264 NME2P22392 152 aa12.39□□□□□ -0.43
CLCC1-202ENST00000348264 HIST1H1TP22492 207 aaPredicted RBP12.39□□□□□ -0.43
CLCC1-202ENST00000348264 SERPINB1P30740 379 aa12.39□□□□□ -0.43
CLCC1-202ENST00000348264 TRHRP34981 398 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms