RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 LRR1Q96L50 414 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 ADAD1Q96M93 576 aaKnown RBP11.67□□□□□ -0.54
COL12A1-202ENST00000345356 POPDC3Q9HBV1 291 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 A0A1B0GVC2 190 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 ZNF487B1APH4 448 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 RGS9O75916 674 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-202ENST00000345356 MATN4O95460 622 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 MRPL3P09001 348 aaKnown RBP11.67□□□□□ -0.54
COL12A1-202ENST00000345356 SOX3P41225 446 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 MRPS6P82932 125 aaKnown RBP11.67□□□□□ -0.54
COL12A1-202ENST00000345356 SLC10A2Q12908 348 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-202ENST00000345356 PTPRCAPQ14761 206 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 PAGE3Q5JUK9 113 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 SLC27A4Q6P1M0 643 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 GDPGP1Q6ZNW5 385 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 PARGQ86W56 976 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 JAGN1Q8N5M9 183 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 TMEM185AQ8NFB2 350 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 CNOT9Q92600 299 aaKnown RBP11.67□□□□□ -0.54
COL12A1-202ENST00000345356 SGTBQ96EQ0 304 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 CD244Q9BZW8 370 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 ACOT13Q9NPJ3 140 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 CDH7Q9ULB5 785 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 INPPL1O15357 1258 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 IRAK2O43187 625 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 PKLRP30613 574 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 MAD2L1BPQ15013 274 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-202ENST00000345356 FLYWCH1Q4VC44 716 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 HFE2Q6ZVN8 426 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 SLC5A8Q8N695 610 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 BOLLQ8N9W6 283 aaKnown RBP11.66□□□□□ -0.54
COL12A1-202ENST00000345356 ZNF416Q9BWM5 594 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 SYT4Q9H2B2 425 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 PCDHB14Q9Y5E9 798 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 NUBP2Q9Y5Y2 271 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 BCL9LQ86UU0 1499 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 A0A0G2JMP0 313 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 HK3P52790 923 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 AP1S1P61966 158 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 APOFQ13790 326 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 B3GNT8Q7Z7M8 397 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 OR4M2Q8NGB6 313 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 GRHL3Q8TE85 626 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 GJD4Q96KN9 370 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-202ENST00000345356 CNTNAP3BQ96NU0 1288 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 TCEAL7Q9BRU2 100 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.66□□□□□ -0.54
COL12A1-202ENST00000345356 OSBPL2Q9H1P3 480 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 KIAA1522Q9P206 1035 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-202ENST00000345356 ABCD2Q9UBJ2 740 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 KCNN3Q9UGI6 736 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 CACNG2Q9Y698 323 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 WASHC1A8K0Z3 465 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 FAAHO00519 579 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 ZNF26P17031 533 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-202ENST00000345356 DUSP4Q13115 394 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 ODF4Q2M2E3 257 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 ATXN7L2Q5T6C5 722 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-202ENST00000345356 COX18Q8N8Q8 333 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 OR4K1Q8NGD4 311 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 NETO1Q8TDF5 533 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 ZNF384Q8TF68 577 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 C5orf34Q96MH7 638 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 MRPL17Q9NRX2 175 aaKnown RBP11.66□□□□□ -0.54
COL12A1-202ENST00000345356 POLHQ9Y253 713 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 GKN3PP0CG01 181 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 ADH7P40394 386 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 RAB8AP61006 207 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 PCBP2Q15366 365 aaKnown RBP eCLIP11.66□□□□□ -0.54
COL12A1-202ENST00000345356 TRAM1Q15629 374 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 GPC2Q8N158 579 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 RHEBL1Q8TAI7 183 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 SGCDQ92629 289 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 CD180Q99467 661 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 CENPOQ9BU64 300 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 A0A0G2JN53 185 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 E7EQ34 232 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 GOSR2O14653 212 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 OIP5O43482 229 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 MSCO60682 206 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 GBAP04062 536 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 BCKDHAP12694 445 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 PON3Q15166 354 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 GNPDA2Q8TDQ7 276 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 CLEC4DQ8WXI8 215 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 SUSD6Q92537 303 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 TESCQ96BS2 214 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 C20orf27Q9GZN8 174 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 FZD8Q9H461 694 aa11.66□□□□□ -0.54
COL12A1-202ENST00000345356 MKKSQ9NPJ1 570 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-202ENST00000345356 TVP23AA6NH52 213 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 POM121CA8CG34 1229 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 CNR2P34972 360 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 PRKXP51817 358 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 PROKR2Q8NFJ6 384 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 SSX3Q99909 188 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 EMCNQ9ULC0 261 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 CLDN24A6NM45 220 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 C2orf74A8MZ97 194 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 STBD1O95210 358 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms