RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 PMP22Q01453 160 aa13.5□□□□□ -0.25
HMGN3-202ENST00000344726 GTF3C1Q12789 2109 aa13.5□□□□□ -0.25
HMGN3-202ENST00000344726 FAM153CQ494X1 144 aa13.5□□□□□ -0.25
HMGN3-202ENST00000344726 CRYBG3Q68DQ2 2970 aa13.5□□□□□ -0.25
HMGN3-202ENST00000344726 FAM180AQ6UWF9 173 aa13.5□□□□□ -0.25
HMGN3-202ENST00000344726 GOLGA7Q7Z5G4 137 aa13.5□□□□□ -0.25
HMGN3-202ENST00000344726 TRIM44Q96DX7 344 aaPredicted RBP13.5□□□□□ -0.25
HMGN3-202ENST00000344726 ZNF354BQ96LW1 612 aa13.5□□□□□ -0.25
HMGN3-202ENST00000344726 SIGLEC12Q96PQ1 595 aa13.5□□□□□ -0.25
HMGN3-202ENST00000344726 RHOXF2Q9BQY4 288 aa13.5□□□□□ -0.25
HMGN3-202ENST00000344726 HES7Q9BYE0 225 aa13.5□□□□□ -0.25
HMGN3-202ENST00000344726 PRTFDC1Q9NRG1 225 aa13.5□□□□□ -0.25
HMGN3-202ENST00000344726 OLAHQ9NV23 265 aa13.5□□□□□ -0.25
HMGN3-202ENST00000344726 KCMF1Q9P0J7 381 aa13.5□□□□□ -0.25
HMGN3-202ENST00000344726 TEKT2Q9UIF3 430 aa13.5□□□□□ -0.25
HMGN3-202ENST00000344726 OSGIN2Q9Y236 505 aa13.5□□□□□ -0.25
HMGN3-202ENST00000344726 MMACHCQ9Y4U1 282 aa13.5□□□□□ -0.25
HMGN3-202ENST00000344726 PCNX1Q96RV3 2341 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 SAP18O00422 153 aaKnown RBP13.49□□□□□ -0.25
HMGN3-202ENST00000344726 DDAH2O95865 285 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 SBK3P0C264 359 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 ATP5A1P25705 553 aaKnown RBP13.49□□□□□ -0.25
HMGN3-202ENST00000344726 HSD17B7P56937 341 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 TUBA3CQ13748 450 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 GTF2H2Q13888 395 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 ELOAQ14241 798 aaKnown RBP13.49□□□□□ -0.25
HMGN3-202ENST00000344726 MEP1AQ16819 746 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 GTF2H2CQ6P1K8 395 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 KLC3Q6P597 504 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 TUBA3EQ6PEY2 450 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 CLNKQ7Z7G1 428 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 IFT20Q8IY31 132 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 BCORP1Q8N888 145 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 PTGR2Q8N8N7 351 aaPredicted RBP13.49□□□□□ -0.25
HMGN3-202ENST00000344726 APCDD1LQ8NCL9 501 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 MDS2Q8NDY4 140 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 HUS1BQ8NHY5 278 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 NR4A3Q92570 626 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 UBE2E3Q969T4 207 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 KCNC2Q96PR1 638 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 MAPKAP1Q9BPZ7 522 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 SORBS1Q9BX66 1292 aaKnown RBP13.49□□□□□ -0.25
HMGN3-202ENST00000344726 TXLNGYQ9BZA5 131 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 EPB41L4BQ9H329 900 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 OR51B5Q9H339 312 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 COPS7BQ9H9Q2 264 aaPredicted RBP13.49□□□□□ -0.25
HMGN3-202ENST00000344726 ANKRD10Q9NXR5 420 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 XPR1Q9UBH6 696 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 ANGPTL3Q9Y5C1 460 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 IKBKGQ9Y6K9 419 aa13.49□□□□□ -0.25
HMGN3-202ENST00000344726 A0A088AWK7 358 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 MYOCOSA0A1B0GUC4 107 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 EXOC1LA0A1B0GW35 172 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 OR7A17O14581 309 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 RIPK2O43353 540 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 PRAMEF2O60811 474 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 KRT38O76015 456 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 MYO1DO94832 1006 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 SCELO95171 688 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 ABHD2P08910 425 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 ZNF10P21506 573 aaPredicted RBP13.48□□□□□ -0.25
HMGN3-202ENST00000344726 EEF1DP29692 281 aaKnown RBP13.48□□□□□ -0.25
HMGN3-202ENST00000344726 HPDP32754 393 aaPredicted RBP13.48□□□□□ -0.25
HMGN3-202ENST00000344726 CD96P40200 585 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 KCNK10P57789 538 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 DDX39BQ13838 428 aaKnown RBP13.48□□□□□ -0.25
HMGN3-202ENST00000344726 INAQ16352 499 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 DEPDC1Q5TB30 811 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 ZNF468Q5VIY5 522 aaPredicted RBP13.48□□□□□ -0.25
HMGN3-202ENST00000344726 KHDRBS2Q5VWX1 349 aaKnown RBP13.48□□□□□ -0.25
HMGN3-202ENST00000344726 LIPJQ5W064 366 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 TAOK1Q7L7X3 1001 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 MYLK4Q86YV6 388 aaPredicted RBP13.48□□□□□ -0.25
HMGN3-202ENST00000344726 ZNF595Q8IYB9 648 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 GSPT2Q8IYD1 628 aaKnown RBP13.48□□□□□ -0.25
HMGN3-202ENST00000344726 TMEM151AQ8N4L1 468 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 ACOT4Q8N9L9 421 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 PHF21BQ96EK2 531 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 SCYL1Q96KG9 808 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 C5orf34Q96MH7 638 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 NSUN5Q96P11 429 aaKnown RBP13.48□□□□□ -0.25
HMGN3-202ENST00000344726 MTERF1Q99551 399 aaKnown RBP13.48□□□□□ -0.25
HMGN3-202ENST00000344726 TBCDQ9BTW9 1192 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 CDCP1Q9H5V8 836 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 IPPKQ9H8X2 491 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 ACTR8Q9H981 624 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 ZBTB26Q9HCK0 441 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 DMRT3Q9NQL9 472 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 PNO1Q9NRX1 252 aaKnown RBP13.48□□□□□ -0.25
HMGN3-202ENST00000344726 ZNF223Q9UK11 482 aaPredicted RBP13.48□□□□□ -0.25
HMGN3-202ENST00000344726 RNF11Q9Y3C5 154 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 TSC22D4Q9Y3Q8 395 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 CENPEQ02224 2701 aa13.48□□□□□ -0.25
HMGN3-202ENST00000344726 GABRR3A8MPY1 467 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 H0YIV9 168 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 LRRTM2O43300 516 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 ETHE1O95571 254 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 RBP1P09455 135 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 MYBL2P10244 700 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 COL6A2P12110 1019 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms