RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 PRKCAP17252 672 aa17.05■□□□□ 0.32
SMAD4-201ENST00000342988 ARHGAP40Q5TG30 622 aa17.05■□□□□ 0.32
SMAD4-201ENST00000342988 UBE2UQ5VVX9 321 aa17.05■□□□□ 0.32
SMAD4-201ENST00000342988 APMAPQ9HDC9 416 aa17.05■□□□□ 0.32
SMAD4-201ENST00000342988 HERVK_113P63132 956 aa17.05■□□□□ 0.32
SMAD4-201ENST00000342988 GNPDA2Q8TDQ7 276 aa17.05■□□□□ 0.32
SMAD4-201ENST00000342988 RNF170Q96K19 258 aa17.05■□□□□ 0.32
SMAD4-201ENST00000342988 MTERF1Q99551 399 aaKnown RBP17.05■□□□□ 0.32
SMAD4-201ENST00000342988 ERVK-6Q9BXR3 956 aa17.05■□□□□ 0.32
SMAD4-201ENST00000342988 K7EPK0 472 aa17.05■□□□□ 0.32
SMAD4-201ENST00000342988 GHRHRQ02643 423 aa17.05■□□□□ 0.32
SMAD4-201ENST00000342988 DAG1Q14118 895 aa17.05■□□□□ 0.32
SMAD4-201ENST00000342988 FAM71E2Q8N5Q1 922 aa17.05■□□□□ 0.32
SMAD4-201ENST00000342988 ASB9Q96DX5 294 aa17.05■□□□□ 0.32
SMAD4-201ENST00000342988 GPR21Q99679 349 aa17.05■□□□□ 0.32
SMAD4-201ENST00000342988 SIRPGQ9P1W8 387 aa17.05■□□□□ 0.32
SMAD4-201ENST00000342988 FZD4Q9ULV1 537 aa17.05■□□□□ 0.32
SMAD4-201ENST00000342988 IQGAP3Q86VI3 1631 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 SGPP2Q8IWX5 399 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 ACTRT3Q9BYD9 372 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 FAM124BQ9H5Z6 455 aaPredicted RBP17.04■□□□□ 0.32
SMAD4-201ENST00000342988 SALL1Q9NSC2 1324 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 AK6Q9Y3D8 172 aaKnown RBP17.04■□□□□ 0.32
SMAD4-201ENST00000342988 hCG_1818297A0A087WSY0 165 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 VEGFDO43915 354 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 ESR1P03372 595 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 AGAP7PQ5VUJ5 663 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 AGAP6Q5VW22 663 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 CEACAM20Q6UY09 585 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 SPOCK2Q92563 424 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 RBMXL1Q96E39 390 aaKnown RBP17.04■□□□□ 0.32
SMAD4-201ENST00000342988 AGAP4Q96P64 663 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 SLC6A17Q9H1V8 727 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 VPS29Q9UBQ0 182 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 TDRD6O60522 2096 aaKnown RBP17.04■□□□□ 0.32
SMAD4-201ENST00000342988 FAM149AA5PLN7 773 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 CAPN5O15484 640 aaPredicted RBP17.04■□□□□ 0.32
SMAD4-201ENST00000342988 TFPTP0C1Z6 253 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 FOXO4P98177 505 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 SVBPQ8N300 66 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 PHOSPHO1Q8TCT1 267 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 SPTSSAQ969W0 71 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 DERAQ9Y315 318 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 ITPRIPL2Q3MIP1 535 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 NT5DC1Q5TFE4 455 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 ZNF572Q7Z3I7 529 aaPredicted RBP17.04■□□□□ 0.32
SMAD4-201ENST00000342988 FAM71AQ8IYT1 594 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 PTPN18Q99952 460 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 TTPALQ9BTX7 342 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 SLC25A31Q9H0C2 315 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 GLTPQ9NZD2 209 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 UNC13BO14795 1591 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 TP53I11O14683 189 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 SOX30O94993 753 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 GJB1P08034 283 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 NR0B1P51843 470 aaKnown RBP17.04■□□□□ 0.32
SMAD4-201ENST00000342988 HNRNPA0Q13151 305 aaKnown RBP17.04■□□□□ 0.32
SMAD4-201ENST00000342988 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.04■□□□□ 0.324e-7■■□□□ 12.4
SMAD4-201ENST00000342988 OR1E3Q8WZA6 343 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 SLC25A44Q96H78 314 aaPredicted RBP17.04■□□□□ 0.32
SMAD4-201ENST00000342988 SLA2Q9H6Q3 261 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 LIN7CQ9NUP9 197 aaKnown RBP17.04■□□□□ 0.32
SMAD4-201ENST00000342988 ADAP00813 363 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 MT-ND1P03886 318 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 PMPCAQ10713 525 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 PRAMEF18Q5VWM3 479 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 CRTC1Q6UUV9 634 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 AQP12AQ8IXF9 295 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 OR52B2Q96RD2 323 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 GLOD4Q9HC38 313 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 SLC22A14Q9Y267 594 aa17.04■□□□□ 0.32
SMAD4-201ENST00000342988 FUT10Q6P4F1 479 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 ZNF100Q8IYN0 542 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 IL17RCQ8NAC3 791 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 CMTM7Q96FZ5 175 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 ZNF436Q9C0F3 470 aaPredicted RBP17.03■□□□□ 0.32
SMAD4-201ENST00000342988 TLE6Q9H808 572 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 TAS2R14Q9NYV8 317 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 EEF1E1O43324 174 aaKnown RBP17.03■□□□□ 0.32
SMAD4-201ENST00000342988 CRYZL1O95825 349 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 CHRM5P08912 532 aaPredicted RBP17.03■□□□□ 0.32
SMAD4-201ENST00000342988 ARP10275 920 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 RPS3AP61247 264 aaKnown RBP17.03■□□□□ 0.32
SMAD4-201ENST00000342988 KIAA0895LQ68EN5 471 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 MFSD5Q6N075 450 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 TMPRSS9Q7Z410 1059 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 ZBED3Q96IU2 234 aaPredicted RBP17.03■□□□□ 0.32
SMAD4-201ENST00000342988 NMUR2Q9GZQ4 415 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 A0A1W2PS29 197 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 PTPN2P17706 415 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 QPCTQ16769 361 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 SLC22A25Q6T423 547 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 LGMNQ99538 433 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 CDC6Q99741 560 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 TRIP12Q14669 1992 aaPredicted RBP17.03■□□□□ 0.32
SMAD4-201ENST00000342988 UPP1Q16831 310 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 EML3Q32P44 896 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 TRMT2AQ8IZ69 625 aaKnown RBP17.03■□□□□ 0.32
SMAD4-201ENST00000342988 PYURFQ96I23 114 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 KLHL21Q9UJP4 597 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms