RNA–Protein interactions for RNA: ENST00000340356.8

SOX18-201, Transcript of SRY-box 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX18, Length 1,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18-201ENST00000340356 RAB23Q9ULC3 237 aa20.51■□□□□ 0.87
SOX18-201ENST00000340356 MAN2B2Q9Y2E5 1009 aa20.51■□□□□ 0.87
SOX18-201ENST00000340356 ATG4BQ9Y4P1 393 aa20.51■□□□□ 0.87
SOX18-201ENST00000340356 ASB4Q9Y574 426 aa20.51■□□□□ 0.87
SOX18-201ENST00000340356 PCDHGA5Q9Y5G8 931 aa20.51■□□□□ 0.87
SOX18-201ENST00000340356 EME2A4GXA9 379 aaPredicted RBP20.5■□□□□ 0.87
SOX18-201ENST00000340356 PRR33A8MZF0 331 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 DDCP20711 480 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 PTPN6P29350 595 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 GABRA4P48169 554 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 MTPNP58546 118 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 MRPS22P82650 360 aaKnown RBP20.5■□□□□ 0.87
SOX18-201ENST00000340356 SLC9A5Q14940 896 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 TMEM214Q6NUQ4 689 aaKnown RBP20.5■□□□□ 0.87
SOX18-201ENST00000340356 PLXDC1Q8IUK5 500 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 ZCCHC7Q8N3Z6 543 aaKnown RBP20.5■□□□□ 0.87
SOX18-201ENST00000340356 CD180Q99467 661 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 PRPF18Q99633 342 aaKnown RBP20.5■□□□□ 0.87
SOX18-201ENST00000340356 KCNH6Q9H252 994 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 EPB41L1Q9H4G0 881 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 COPS7BQ9H9Q2 264 aaPredicted RBP20.5■□□□□ 0.87
SOX18-201ENST00000340356 MIEF1Q9NQG6 463 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 MAPRE3Q9UPY8 281 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 PCDHB14Q9Y5E9 798 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 UNC13CQ8NB66 2214 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 LNP1A1A4G5 178 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 A8MU76 341 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 DNAJA2O60884 412 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 HOXB9P17482 250 aaPredicted RBP20.5■□□□□ 0.87
SOX18-201ENST00000340356 IL1RNP18510 177 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 ARFIP1P53367 373 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 TGM3Q08188 693 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 TRAP1Q12931 704 aaKnown RBP20.5■□□□□ 0.87
SOX18-201ENST00000340356 ZC3H12BQ5HYM0 836 aaKnown RBP20.5■□□□□ 0.87
SOX18-201ENST00000340356 NDUFAF5Q5TEU4 345 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 R3HCC1LQ7Z5L2 792 aaKnown RBP20.5■□□□□ 0.87
SOX18-201ENST00000340356 SPATA24Q86W54 205 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 DTWD1Q8N5C7 304 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 AURKBQ96GD4 344 aaPredicted RBP20.5■□□□□ 0.87
SOX18-201ENST00000340356 MAPKAP1Q9BPZ7 522 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 IKZF5Q9H5V7 419 aa20.5■□□□□ 0.87
SOX18-201ENST00000340356 FAM120CQ9NX05 1096 aaKnown RBP20.5■□□□□ 0.87
SOX18-201ENST00000340356 MN1Q10571 1320 aaPredicted RBP20.49■□□□□ 0.87
SOX18-201ENST00000340356 A0A096LPI6 279 aa20.49■□□□□ 0.87
SOX18-201ENST00000340356 TRBV5-3A0A0A0MS03 114 aa20.49■□□□□ 0.87
SOX18-201ENST00000340356 C15orf38-AP3S2A0A0A6YYH1 394 aa20.49■□□□□ 0.87
SOX18-201ENST00000340356 A0A1W2PR48 441 aa20.49■□□□□ 0.87
SOX18-201ENST00000340356 ZNF860A6NHJ4 632 aa20.49■□□□□ 0.87
SOX18-201ENST00000340356 GLOD5A6NK44 160 aa20.49■□□□□ 0.87
SOX18-201ENST00000340356 RFXANKO14593 260 aa20.49■□□□□ 0.87
SOX18-201ENST00000340356 ZSCAN9O15535 394 aaPredicted RBP20.49■□□□□ 0.87
SOX18-201ENST00000340356 SCELO95171 688 aa20.49■□□□□ 0.87
SOX18-201ENST00000340356 ZBTB11O95625 1053 aaPredicted RBP20.49■□□□□ 0.87
SOX18-201ENST00000340356 CPSF4O95639 269 aaKnown RBP20.49■□□□□ 0.87
SOX18-201ENST00000340356 HSD17B1P14061 328 aa20.49■□□□□ 0.87
SOX18-201ENST00000340356 PNLIPP16233 465 aa20.49■□□□□ 0.87
SOX18-201ENST00000340356 OLR1P78380 273 aa20.49■□□□□ 0.87
SOX18-201ENST00000340356 CCL7P80098 99 aa20.49■□□□□ 0.87
SOX18-201ENST00000340356 MSANTD1Q6ZTZ1 278 aa20.49■□□□□ 0.87
SOX18-201ENST00000340356 ARPINQ7Z6K5 226 aa20.49■□□□□ 0.87
SOX18-201ENST00000340356 PDSS2Q86YH6 399 aa20.49■□□□□ 0.87
SOX18-201ENST00000340356 NRG4Q8WWG1 115 aa20.49■□□□□ 0.87
SOX18-201ENST00000340356 BHLHE41Q9C0J9 482 aaPredicted RBP20.49■□□□□ 0.87
SOX18-201ENST00000340356 PDE7BQ9NP56 450 aa20.49■□□□□ 0.87
SOX18-201ENST00000340356 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.49■□□□□ 0.87
SOX18-201ENST00000340356 PRSS51A0A1B0GVH4 220 aa20.48■□□□□ 0.87
SOX18-201ENST00000340356 A0A1W2PQM1 296 aa20.48■□□□□ 0.87
SOX18-201ENST00000340356 H3BNX3 289 aa20.48■□□□□ 0.87
SOX18-201ENST00000340356 ALOX12P18054 663 aa20.48■□□□□ 0.87
SOX18-201ENST00000340356 TSFMP43897 325 aaKnown RBP20.48■□□□□ 0.87
SOX18-201ENST00000340356 TRA2BP62995 288 aaKnown RBP20.48■□□□□ 0.87
SOX18-201ENST00000340356 HEPACAMQ14CZ8 416 aa20.48■□□□□ 0.87
SOX18-201ENST00000340356 SUZ12Q15022 739 aaKnown RBP20.48■□□□□ 0.87
SOX18-201ENST00000340356 PROX2Q3B8N5 592 aa20.48■□□□□ 0.87
SOX18-201ENST00000340356 LRIF1Q5T3J3 769 aa20.48■□□□□ 0.87
SOX18-201ENST00000340356 C18orf63Q68DL7 685 aa20.48■□□□□ 0.87
SOX18-201ENST00000340356 WDR74Q6RFH5 385 aaPredicted RBP20.48■□□□□ 0.87
SOX18-201ENST00000340356 LRRC74BQ6ZQY2 392 aa20.48■□□□□ 0.87
SOX18-201ENST00000340356 ABHD13Q7L211 337 aa20.48■□□□□ 0.87
SOX18-201ENST00000340356 ARHGEF39Q8N4T4 335 aa20.48■□□□□ 0.87
SOX18-201ENST00000340356 ZNF655Q8N720 491 aaPredicted RBP20.48■□□□□ 0.87
SOX18-201ENST00000340356 OR6C4Q8NGE1 309 aa20.48■□□□□ 0.87
SOX18-201ENST00000340356 MTERF3Q96E29 417 aa20.48■□□□□ 0.87
SOX18-201ENST00000340356 PANX1Q96RD7 426 aa20.48■□□□□ 0.87
SOX18-201ENST00000340356 USP22Q9UPT9 525 aa20.48■□□□□ 0.87
SOX18-201ENST00000340356 URADA6NGE7 173 aa20.47■□□□□ 0.87
SOX18-201ENST00000340356 MED26O95402 600 aa20.47■□□□□ 0.87
SOX18-201ENST00000340356 RPL3P39023 403 aaKnown RBP20.47■□□□□ 0.87
SOX18-201ENST00000340356 GSK3BP49841 420 aa20.47■□□□□ 0.87
SOX18-201ENST00000340356 LIPEQ05469 1076 aa20.47■□□□□ 0.87
SOX18-201ENST00000340356 CYP2R1Q6VVX0 501 aa20.47■□□□□ 0.87
SOX18-201ENST00000340356 ZNF574Q6ZN55 896 aaPredicted RBP20.47■□□□□ 0.87
SOX18-201ENST00000340356 RNF111Q6ZNA4 994 aa20.47■□□□□ 0.87
SOX18-201ENST00000340356 IFNEQ86WN2 208 aa20.47■□□□□ 0.87
SOX18-201ENST00000340356 FAM47BQ8NA70 645 aa20.47■□□□□ 0.87
SOX18-201ENST00000340356 KLHL6Q8WZ60 621 aa20.47■□□□□ 0.87
SOX18-201ENST00000340356 EXOSC8Q96B26 276 aaKnown RBP20.47■□□□□ 0.87
SOX18-201ENST00000340356 RSRC1Q96IZ7 334 aaKnown RBP20.47■□□□□ 0.87
SOX18-201ENST00000340356 CCDC115Q96NT0 180 aa20.47■□□□□ 0.87
SOX18-201ENST00000340356 ANKRD27Q96NW4 1050 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms