RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 MVKQ03426 396 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 ZNF791Q3KP31 576 aaPredicted RBP8.38□□□□□ -1.07
RTN3-202ENST00000339997 BCL2L15Q5TBC7 163 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 Q6ZPB1 254 aaPredicted RBP8.38□□□□□ -1.07
RTN3-202ENST00000339997 KLBQ86Z14 1044 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 SDR16C5Q8N3Y7 309 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 OR6Q1Q8NGQ2 317 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 IRGQQ8WZA9 623 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 TMEM80Q96HE8 168 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 YTHDF1Q9BYJ9 559 aaKnown RBP8.38□□□□□ -1.07
RTN3-202ENST00000339997 TXLNGYQ9BZA5 131 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 ZNF696Q9H7X3 374 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 FAIMQ9NVQ4 179 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 PADI2Q9Y2J8 665 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 UNC80Q8N2C7 3258 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 PKD1L3Q7Z443 1732 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 E7ESA3 106 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 PIP5K1CO60331 668 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 GRIN3BO60391 1043 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 PPM1BO75688 479 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 POP7O75817 140 aaKnown RBP8.38□□□□□ -1.07
RTN3-202ENST00000339997 PDYNP01213 254 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 ZNF823P16415 610 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 STK19P49842 368 aaPredicted RBP8.38□□□□□ -1.07
RTN3-202ENST00000339997 SMSP52788 366 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 SPHARQ15513 63 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 NOXRED1Q6NXP6 359 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 GPR135Q8IZ08 494 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 KDM1BQ8NB78 822 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 OR9Q2Q8NGE9 314 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 SHKBP1Q8TBC3 707 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 LRR1Q96L50 414 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 TMEM68Q96MH6 324 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 MND1Q9BWT6 205 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 BCO2Q9BYV7 579 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 TMED5Q9Y3A6 229 aa8.38□□□□□ -1.07
RTN3-202ENST00000339997 ZNF878C9JN71 531 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 DLGAP1O14490 977 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 GRID2O43424 1007 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 DENRO43583 198 aaKnown RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 RAD1O60671 282 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 MMP20O60882 483 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 CD1DP15813 335 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 SOX3P41225 446 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 MAP2K3P46734 347 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 APLP1P51693 650 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 FKBP1AP62942 108 aaKnown RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 SOX4Q06945 474 aaPredicted RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 AMZ1Q400G9 498 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 PLEKHG7Q6ZR37 379 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 OXR1Q8N573 874 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 DTWD1Q8N5C7 304 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 TRUB1Q8WWH5 349 aaKnown RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 SCRN2Q96FV2 425 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 MRGPRX2Q96LB1 330 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 TMEM185BQ9H7F4 350 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 TLR6Q9Y2C9 796 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 TIMM8BQ9Y5J9 83 aaPredicted RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 MYH7BA7E2Y1 1941 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 MANSC4A6NHS7 340 aaPredicted RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 CLCA1A8K7I4 914 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 B4GALT2O60909 372 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 FBXO45P0C2W1 286 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 OR12D1P0DN82 309 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 ACRP10323 421 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 SSTR2P30874 369 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 EVI2BP34910 448 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 MASP1P48740 699 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 GATMP50440 423 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 PAFAH1B3Q15102 231 aaKnown RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 ADGRF1Q5T601 910 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 SSX6Q7RTT6 188 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 MCEMP1Q8IX19 187 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 CPA6Q8N4T0 437 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 METTL27Q8N6F8 245 aaPredicted RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 LMNTD1Q8N9Z9 388 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 OR4E2Q8NGC2 313 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 C9orf43Q8TAL5 461 aaPredicted RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 NETO1Q8TDF5 533 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 RC3H2Q9HBD1 1191 aaKnown RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 TM9SF3Q9HD45 589 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 NLGN3Q9NZ94 848 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 SARDHQ9UL12 918 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 MYH2Q9UKX2 1941 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 DIDO1Q9BTC0 2240 aaKnown RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 POM121CA8CG34 1229 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 VSTM5A8MXK1 200 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 CSNK2A2P19784 350 aaPredicted RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 TUBG1P23258 451 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 PCSK6P29122 969 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 MPIP34949 423 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 MAGEA8P43361 318 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 CLCN7P51798 805 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 VMACQ2NL98 169 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 DPY19L1Q2PZI1 675 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 VITQ6UXI7 678 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 TMIGD1Q6UXZ0 262 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 ZNF548Q8NEK5 533 aaPredicted RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 FAM46DQ8NEK8 389 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 S100PBPQ96BU1 408 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms