RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 MAP7Q14244 749 aa16.9■□□□□ 0.3
SDCBP2-201ENST00000339987 NKAIN1Q4KMZ8 207 aa16.9■□□□□ 0.3
SDCBP2-201ENST00000339987 ARHGAP40Q5TG30 622 aa16.9■□□□□ 0.3
SDCBP2-201ENST00000339987 IKBIPQ70UQ0 350 aa16.9■□□□□ 0.3
SDCBP2-201ENST00000339987 GPR180Q86V85 440 aa16.9■□□□□ 0.3
SDCBP2-201ENST00000339987 ANKS4BQ8N8V4 417 aa16.9■□□□□ 0.3
SDCBP2-201ENST00000339987 OR5T3Q8NGG3 340 aa16.9■□□□□ 0.3
SDCBP2-201ENST00000339987 COL26A1Q96A83 441 aa16.9■□□□□ 0.3
SDCBP2-201ENST00000339987 TM4SF18Q96CE8 201 aa16.9■□□□□ 0.3
SDCBP2-201ENST00000339987 CATSPER2Q96P56 530 aa16.9■□□□□ 0.3
SDCBP2-201ENST00000339987 MAPKAP1Q9BPZ7 522 aa16.9■□□□□ 0.3
SDCBP2-201ENST00000339987 ZNF385DQ9H6B1 395 aa16.9■□□□□ 0.3
SDCBP2-201ENST00000339987 MS4A12Q9NXJ0 267 aa16.9■□□□□ 0.3
SDCBP2-201ENST00000339987 HCN3Q9P1Z3 774 aa16.9■□□□□ 0.3
SDCBP2-201ENST00000339987 HEY2Q9UBP5 337 aa16.9■□□□□ 0.3
SDCBP2-201ENST00000339987 MAU2Q9Y6X3 613 aa16.9■□□□□ 0.3
SDCBP2-201ENST00000339987 SPACA6W5XKT8 324 aa16.9■□□□□ 0.3
SDCBP2-201ENST00000339987 DNAJB6O75190 326 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 KLK3P07288 261 aaPredicted RBP16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 RNH1P13489 461 aaKnown RBP16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 AGXTP21549 392 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 SLC5A2P31639 672 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 C21orf58P58505 322 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 TAS2R50P59544 299 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 KLC1Q07866 573 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 TERF2Q15554 542 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 PDCD4Q53EL6 469 aaKnown RBP16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 FAM71E1Q6IPT2 247 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 ZNF517Q6ZMY9 492 aaPredicted RBP16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 MED25Q71SY5 747 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 COX15Q7KZN9 410 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 CLNKQ7Z7G1 428 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 GALNT6Q8NCL4 622 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 FKBP10Q96AY3 582 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 TSSK3Q96PN8 268 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 ASCL3Q9NQ33 180 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 PRDM9Q9NQV7 894 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 SDR39U1Q9NRG7 319 aaPredicted RBP16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 SLC22A11Q9NSA0 550 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 MRGBPQ9NV56 204 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 BAIAP2L1Q9UHR4 511 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 KLK13Q9UKR3 277 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 FBXW2Q9UKT8 454 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 ACSL6Q9UKU0 697 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 MAPRE3Q9UPY8 281 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 ATG4BQ9Y4P1 393 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 FER1L5A0AVI2 2057 aa16.89■□□□□ 0.29
SDCBP2-201ENST00000339987 IGLV3-12A0A075B6K2 115 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 A0A1W2PR48 441 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 ANKRD28O15084 1053 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 PROM1O43490 865 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 PRMT3O60678 531 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 IL3P08700 152 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 IL10P22301 178 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 CLDN8P56748 225 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 STX1BP61266 288 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 MAT1AQ00266 395 aaKnown RBP16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 TNFRSF17Q02223 184 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 SQLEQ14534 574 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 PTGR1Q14914 329 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 C6orf15Q6UXA7 325 aaPredicted RBP16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 TMEM132CQ8N3T6 1108 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 CPSF7Q8N684 471 aaKnown RBP16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 EFCAB3Q8N7B9 438 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 CCDC197Q8NCU1 140 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 OR51Q1Q8NH59 317 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 NXPE2Q96DL1 559 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 RNF31Q96EP0 1072 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 EGLN2Q96KS0 407 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 MARK4Q96L34 752 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 OR1F2PQ96R84 312 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 FAIM2Q9BWQ8 316 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 ACTL8Q9H568 366 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 MKKSQ9NPJ1 570 aaPredicted RBP16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 TEX10Q9NXF1 929 aaPredicted RBP16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 ZIM2Q9NZV7 527 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 G3BP2Q9UN86 482 aaKnown RBP16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 SEC16AO15027 2179 aa16.88■□□□□ 0.29
SDCBP2-201ENST00000339987 BLACEA4D250 179 aa16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 CYR61O00622 381 aa16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 CCDC22O60826 627 aa16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 NR2F6P10588 404 aa16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 DRD2P14416 443 aa16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 NCF2P19878 526 aaPredicted RBP16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 CPN2P22792 545 aa16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 TLX1P31314 330 aaPredicted RBP16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 BUD31P41223 144 aaPredicted RBP16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 SHC2P98077 582 aa16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 HEPACAMQ14CZ8 416 aa16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 RPS6KA2Q15349 733 aa16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 SYT16Q17RD7 645 aa16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 OVCH1Q7RTY7 1134 aa16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 MIER2Q8N344 545 aa16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 CLHC1Q8NHS4 586 aa16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 CDC26Q8NHZ8 85 aa16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 TGIF2Q9GZN2 237 aa16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 SLC26A1Q9H2B4 701 aa16.87■□□□□ 0.29
SDCBP2-201ENST00000339987 WDR41Q9HAD4 459 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms