RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 MTFR2Q6P444 385 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 ATP6V1C2Q8NEY4 427 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 OR2AP1Q8NGE2 309 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 WDR48Q8TAF3 677 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 APH1BQ8WW43 257 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 KLHL6Q8WZ60 621 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 HRASLS5Q96KN8 279 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 FAM120CQ9NX05 1096 aaKnown RBP13.55□□□□□ -0.24
PCDH8-201ENST00000338862 SPATA2Q9UM82 520 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 CLCA2Q9UQC9 943 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 CSTF1Q05048 431 aaKnown RBP13.55□□□□□ -0.24
PCDH8-201ENST00000338862 LMAN2Q12907 356 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 KLHL12Q53G59 568 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 MED27Q6P2C8 311 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 SERPINA11Q86U17 422 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 UXS1Q8NBZ7 420 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 RNFT2Q96EX2 444 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 FRMD6Q96NE9 622 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 PTGFRNQ9P2B2 879 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 SLC25A13Q9UJS0 675 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 ALPK2Q86TB3 2170 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.55□□□□□ -0.24
PCDH8-201ENST00000338862 PDE9AO76083 593 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 FCER2P06734 321 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 IL7P13232 177 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 DDX5P17844 614 aaKnown RBP13.55□□□□□ -0.24
PCDH8-201ENST00000338862 CRISP1P54107 249 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 EIF4EBP2Q13542 120 aaPredicted RBP13.55□□□□□ -0.24
PCDH8-201ENST00000338862 TEAD4Q15561 434 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 DUSP7Q16829 419 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 WSCD2Q2TBF2 565 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 CRB2Q5IJ48 1285 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 OR7G3Q8NG95 312 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 C1QTNF3Q9BXJ4 246 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 TRBV4-1A0A0J9YWV2 114 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 C2orf92A0A1B0GVN3 265 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 A0A1W2PPK0 400 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 C12orf71A8MTZ7 269 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 ISM1B1AKI9 464 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 C8GP07360 202 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 IL3P08700 152 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 CHMP24386 653 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 MICAQ29983 383 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 LRRC70Q7Z2Q7 622 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 PIGKQ92643 395 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 TXNDC15Q96J42 360 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 SLC22A4Q9H015 551 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 CCDC177Q9NQR7 707 aaPredicted RBP13.54□□□□□ -0.24
PCDH8-201ENST00000338862 ITM2BQ9Y287 266 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 CCL27Q9Y4X3 112 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 LCTP09848 1927 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 M0R3H8 397 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 BTN3A3O00478 584 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 UGT2B17O75795 530 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 C8orf89P0DMQ9 161 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 JUPP14923 745 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 CELP19835 753 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 APEX1P27695 318 aaKnown RBP13.54□□□□□ -0.24
PCDH8-201ENST00000338862 BMPR1AP36894 532 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 CXCR4P61073 352 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 HOXC5Q00444 222 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 ALG1LQ6GMV1 187 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 ELMOD1Q8N336 334 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 NEIL2Q969S2 332 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 MACROD1Q9BQ69 325 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 TRMT61BQ9BVS5 477 aaKnown RBP13.54□□□□□ -0.24
PCDH8-201ENST00000338862 ZNF282Q9UDV7 671 aaPredicted RBP13.54□□□□□ -0.24
PCDH8-201ENST00000338862 SCAMP2O15127 329 aaKnown RBP13.54□□□□□ -0.24
PCDH8-201ENST00000338862 AOC2O75106 756 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 TOXO94900 526 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 HEPACAMQ14CZ8 416 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 TBCEQ15813 527 aaPredicted RBP13.54□□□□□ -0.24
PCDH8-201ENST00000338862 GPR33Q49SQ1 333 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 MORN1Q5T089 497 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 KLHDC8BQ8IXV7 354 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 ELMOD2Q8IZ81 293 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 PCSK9Q8NBP7 692 aaKnown RBP13.54□□□□□ -0.24
PCDH8-201ENST00000338862 NLGN4YQ8NFZ3 816 aaPredicted RBP13.54□□□□□ -0.24
PCDH8-201ENST00000338862 RAET1EQ8TD07 263 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 RELTQ969Z4 430 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 EFHD2Q96C19 240 aaPredicted RBP13.54□□□□□ -0.24
PCDH8-201ENST00000338862 LRR1Q96L50 414 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 OR2AG1Q9H205 316 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 CMAHPQ9Y471 501 aa13.54□□□□□ -0.24
PCDH8-201ENST00000338862 LOC102723532A0A0G2JNH3 316 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 GALTP07902 379 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 JUNDP17535 347 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 ASMTP46597 345 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 KCNJ10P78508 379 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 ARSIQ5FYB1 569 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 IDNKQ5T6J7 187 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 RAET1GQ6H3X3 334 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 TUBA3EQ6PEY2 450 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 TPRG1Q6ZUI0 275 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 SOCS4Q8WXH5 440 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 SNAPC3Q92966 411 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 AP2M1Q96CW1 435 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 PSD2Q9BQI7 771 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 UCK2Q9BZX2 261 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 OR2B2Q9GZK3 357 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms