RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 HCN4Q9Y3Q4 1203 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF451Q9Y4E5 1061 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 TLR4O00206 839 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 SOX9P48436 509 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 CLCN2P51788 898 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 RPP38P78345 283 aaKnown RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 XKR7Q5GH72 579 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 OR4C11Q6IEV9 310 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF683Q8IZ20 524 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 OR2L2Q8NH16 312 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 C9orf43Q8TAL5 461 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 KLHDC7BQ96G42 594 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 ITPAQ9BY32 194 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 WDR12Q9GZL7 423 aaKnown RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 TMEM184CQ9NVA4 438 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 CD300AQ9UGN4 299 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 USP22Q9UPT9 525 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 DNMT3AQ9Y6K1 912 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 IRGMA1A4Y4 181 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 FAM170BA6NMN3 283 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 H3BUI4 141 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 ASGR2P07307 311 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 GSTM3P21266 225 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 TPP2P29144 1249 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 USP30Q70CQ3 517 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 CHMP1BQ7LBR1 199 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF551Q7Z340 670 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 WDR48Q8TAF3 677 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 MOAP1Q96BY2 351 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 CBFA2T3O75081 653 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 RPLP0P05388 317 aaKnown RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 TNFRSF1BP20333 461 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 RAB15P59190 212 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 GGTA1PQ4G0N0 100 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 TMEM240Q5SV17 173 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 EGFLAMQ63HQ2 1017 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 TRAF7Q6Q0C0 670 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 LAPTM4BQ86VI4 370 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF563Q8TA94 476 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 FCGR1BQ92637 280 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 MAL2Q969L2 176 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 TSACCQ96A04 125 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 CDCA3Q99618 268 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 CYP8B1Q9UNU6 501 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 H0YIV9 168 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 SOX14O95416 240 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 C1orf105O95561 183 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 PIM1P11309 404 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 TRIQKQ629K1 86 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 KIAA1161Q6NSJ0 714 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 POMZP3Q6PJE2 187 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 FBXO15Q8NCQ5 510 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 IL1RAPQ9NPH3 570 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 BTNL2Q9UIR0 455 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 MGAT4BQ9UQ53 548 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 WBP11Q9Y2W2 641 aaKnown RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 MRPL28Q13084 256 aaKnown RBP6.02□□□□□ -1.45
PRKDC-202ENST00000338368 PRRT3Q5FWE3 981 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 LILRA6Q6PI73 481 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 LINC00471Q8N535 108 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 FAM129BQ96TA1 746 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 TMEM9Q9P0T7 183 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 TCRBV21S2A2A0A5A6 115 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 H3BNC9 293 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 AGR2O95994 175 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 LGALS3BPQ08380 585 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 CPZQ66K79 652 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 SHQ1Q6PI26 577 aaKnown RBP6.02□□□□□ -1.45
PRKDC-202ENST00000338368 XKR5Q6UX68 686 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 TRIM46Q7Z4K8 759 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 HS3ST5Q8IZT8 346 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 AQP11Q8NBQ7 271 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 OR8K5Q8NH50 307 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 CNIH3Q8TBE1 160 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 PIKFYVEQ9Y2I7 2098 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 SLC22A1O15245 554 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 INMTO95050 263 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 CLK3P49761 638 aaKnown RBP6.02□□□□□ -1.45
PRKDC-202ENST00000338368 RAPSNQ13702 412 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 IKBIPQ70UQ0 350 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 PDZD3Q86UT5 571 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 RFKQ969G6 155 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 TMIGD2Q96BF3 282 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 BRF2Q9HAW0 419 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 GALNT8Q9NY28 637 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 MKLN1Q9UL63 735 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 CENPXA8MT69 81 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 RFXAPO00287 272 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 IMPA1P29218 277 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 NDUFAF5Q5TEU4 345 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 UGT2A3Q6UWM9 527 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 CYHR1Q6ZMK1 362 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 ASPGQ86U10 573 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 TESCQ96BS2 214 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 FEVQ99581 238 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 CABIN1Q9Y6J0 2220 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 EFCAB9A8MZ26 197 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 KLK8O60259 260 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 SLC25A12O75746 678 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF77Q15935 545 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms