RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 MANFP55145 182 aaKnown RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 ARPC4P59998 168 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 ID2Q02363 134 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 SRSF5Q13243 272 aaKnown RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 SMN1Q16637 294 aaKnown RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 UNC5DQ6UXZ4 953 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 ZNF793Q6ZN11 406 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 C11orf74Q86VG3 221 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 MEX3DQ86XN8 651 aaKnown RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 METTL4Q8N3J2 472 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 KCT2Q8NC54 265 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 BPIFB6Q8NFQ5 453 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 MRPS26Q9BYN8 205 aaKnown RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 AMBNQ9NP70 447 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 SLC6A20Q9NP91 592 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 INIPQ9NRY2 104 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 PRSS38A1L453 326 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 TPST2O60704 377 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 ENDOUP21128 410 aaKnown RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 ASMTP46597 345 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 RPE65Q16518 533 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 CTU2Q2VPK5 515 aaKnown RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 KIAA1614Q5VZ46 1190 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 FAM71E1Q6IPT2 247 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 UBE3DQ7Z6J8 389 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 CLVS1Q8IUQ0 354 aaPredicted RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 OR4N5Q8IXE1 308 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 MFSD2AQ8NA29 543 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 ATG16L2Q8NAA4 619 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 PHOX2BQ99453 314 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 CDCA3Q99618 268 aaPredicted RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 RHBGQ9H310 441 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 POLR1BQ9H9Y6 1135 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 BAG5Q9UL15 447 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 PGRMC2O15173 223 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 PLRG1O43660 514 aaKnown RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 B4GALT2O60909 372 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 TPMTP51580 245 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 IL5RAQ01344 420 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 APOFQ13790 326 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 DEPDC1Q5TB30 811 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 C18orf63Q68DL7 685 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 EID3Q8N140 333 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 VANGL1Q8TAA9 524 aaPredicted RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 FCRL1Q96LA6 429 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 GDF15Q99988 308 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 ZNF717Q9BY31 904 aaPredicted RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 C6orf106Q9H6K1 298 aaPredicted RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 MRPS30Q9NP92 439 aaKnown RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 EBF1Q9UH73 591 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 GSAPA4D1B5 854 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 GPX2P18283 190 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 POLR2CP19387 275 aaPredicted RBP11.98□□□□□ -0.49
LIMK1-201ENST00000336180 MYF6P23409 242 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 PTX3P26022 381 aaPredicted RBP11.98□□□□□ -0.49
LIMK1-201ENST00000336180 CERS1P27544 350 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 MVDP53602 400 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 PPP1CAP62136 330 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 LCTLQ6UWM7 567 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 CHRDL2Q6WN34 429 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 TMEM26Q6ZUK4 368 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 LCN9Q8WX39 176 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 TM4SF18Q96CE8 201 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 ABHD8Q96I13 439 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 BMFQ96LC9 184 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 WFDC6Q9BQY6 131 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 MS4A8Q9BY19 250 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 LMAN2LQ9H0V9 348 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 STARD5Q9NSY2 213 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 RLIMQ9NVW2 624 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 FAM118AQ9NWS6 357 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 IFT80Q9P2H3 777 aaPredicted RBP11.98□□□□□ -0.49
LIMK1-201ENST00000336180 A0A0J9YVX5 310 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 GRXCR2A6NFK2 248 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 PRAMEF25A6NGN4 478 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 TRIM64CA6NLI5 447 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 CCNDBP1O95273 360 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 FABP3P05413 133 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 BCHEP06276 602 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 MAOBP27338 520 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 RRM2P31350 389 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 BSGP35613 385 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 DUSP2Q05923 314 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 PMS2P3Q13401 168 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 SCARB2Q14108 478 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 RNF165Q6ZSG1 346 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 SIMC1Q8NDZ2 872 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 TNIP2Q8NFZ5 429 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 COL26A1Q96A83 441 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 HHIPQ96QV1 700 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 PRR14Q9BWN1 585 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 DGCR6LQ9BY27 220 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 QRSL1Q9H0R6 528 aaKnown RBP11.98□□□□□ -0.49
LIMK1-201ENST00000336180 TMEM74BQ9NUR3 256 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 KIF17Q9P2E2 1029 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 TRPC4Q9UBN4 977 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 TMA7Q9Y2S6 64 aaKnown RBP11.98□□□□□ -0.49
LIMK1-201ENST00000336180 PABPC4LP0CB38 370 aaKnown RBP11.98□□□□□ -0.49
LIMK1-201ENST00000336180 DAPP51397 102 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 ADARB1P78563 741 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms