RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 INHAP05111 366 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 CHRM5P08912 532 aaPredicted RBP15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 SOX6P35712 828 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 NNMTP40261 264 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 HNF4AP41235 474 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 MTAPQ13126 283 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 GPNMBQ14956 572 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 AGAP6Q5VW22 663 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 RNF130Q86XS8 419 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 TMEM25Q86YD3 366 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 TRAPPC5Q8IUR0 188 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 CFAP206Q8IYR0 622 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 METTL4Q8N3J2 472 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 KBTBD8Q8NFY9 601 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 WDR36Q8NI36 951 aaKnown RBP15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 FIBINQ8TAL6 211 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 ZNF558Q96NG5 402 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 AGAP4Q96P64 663 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 PKP4Q99569 1192 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 NDUFAF4Q9P032 175 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 STOX2Q9P2F5 926 aaPredicted RBP15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 ZNF282Q9UDV7 671 aaPredicted RBP15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 CORO2BQ9UQ03 480 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 LYVE1Q9Y5Y7 322 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 NUPL2O15504 423 aaKnown RBP15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 CTSCP53634 463 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 CDC42P60953 191 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 ARSIQ5FYB1 569 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 CDKL4Q5MAI5 379 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 C6orf132Q5T0Z8 1188 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 METTL3Q86U44 580 aaKnown RBP15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 APH1BQ8WW43 257 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 FCGR1BQ92637 280 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 CCM2Q9BSQ5 444 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 MCCC2Q9HCC0 563 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 EHD3Q9NZN3 535 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 TMPRSS11EQ9UL52 423 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 TRAV19A0A0A6YYK7 116 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 GADD45GO95257 159 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 PTHP01270 115 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 MPC1LP0DKB6 136 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 ANXA8P13928 327 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 PDHA2P29803 388 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 CSNK2BP67870 215 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 CTAG1AP78358 180 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 UAP1L1Q3KQV9 507 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 MED27Q6P2C8 311 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 IDO2Q6ZQW0 420 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 PLEKHM3Q6ZWE6 761 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 GAREM2Q75VX8 874 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 UBASH3BQ8TF42 649 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 NEIL2Q969S2 332 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 MSANTD3Q96H12 275 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 C7orf34Q96L11 122 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 WRAP53Q9BUR4 548 aaKnown RBP15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 C11orf16Q9NQ32 467 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 TIGARQ9NQ88 270 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 SRRDQ9UH36 339 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 DYRK1BQ9Y463 629 aa15.82■□□□□ 0.12
CDC42EP4-201ENST00000335793 CLDN24A6NM45 220 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 H3BM21 787 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 PCDH17O14917 1159 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 GGT2P36268 569 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 DEFA1P59665 94 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 DEFA3P59666 94 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 CDK6Q00534 326 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 SLBPQ14493 270 aaKnown RBP eCLIP15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 TSTQ16762 297 aaKnown RBP15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 DEFB115Q30KQ5 88 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 C10orf62Q5T681 223 aaPredicted RBP15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 MSANTD1Q6ZTZ1 278 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 SYNPOQ8N3V7 929 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 ANGPTL6Q8NI99 470 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 TRMT2BQ96GJ1 504 aaKnown RBP15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 PSORS1C1Q9UIG5 152 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 GFYI3L273 518 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 GRM6O15303 877 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 ALDH1A1P00352 501 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 KLK1P06870 262 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 CRISP3P54108 245 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 TAS2R50P59544 299 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 DSTNP60981 165 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 HIST2H2AA3Q6FI13 130 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 TRIM40Q6P9F5 258 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 DDX53Q86TM3 631 aaKnown RBP15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 DNAJC22Q8N4W6 341 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 AQP11Q8NBQ7 271 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 NEDD4LQ96PU5 975 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 EPYCQ99645 322 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 UCK2Q9BZX2 261 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 ANKDD1BA6NHY2 528 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 I3L521 148 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 M0R082 166 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 LEFTY2O00292 366 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 KPNA3O00505 521 aaPredicted RBP15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 SOX14O95416 240 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 IDSP22304 550 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 SP140Q13342 867 aa15.81■□□□□ 0.12
CDC42EP4-201ENST00000335793 TRIM48Q8IWZ4 208 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms