RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ALPK1Q96QP1 1244 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 CD180Q99467 661 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 PBX4Q9BYU1 374 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 RNF121Q9H920 327 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 MAN2B2Q9Y2E5 1009 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 MAU2Q9Y6X3 613 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 COMMD3-BMI1R4GMX3 469 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 TRIM3O75382 744 aaPredicted RBP14.4□□□□□ -0.1
C9orf47-201ENST00000334490 KHDRBS3O75525 346 aaKnown RBP14.4□□□□□ -0.1
C9orf47-201ENST00000334490 PORP16435 677 aaPredicted RBP14.4□□□□□ -0.1
C9orf47-201ENST00000334490 ZNF3P17036 446 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 HMGA1P17096 107 aaKnown RBP14.4□□□□□ -0.1
C9orf47-201ENST00000334490 MAGP20916 626 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 IGFBP6P24592 240 aaPredicted RBP14.4□□□□□ -0.1
C9orf47-201ENST00000334490 SGSHP51688 502 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 PPP3R1P63098 170 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 CTBSQ01459 385 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 PLCXD2Q0VAA5 305 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 DCTN2Q13561 401 aaKnown RBP14.4□□□□□ -0.1
C9orf47-201ENST00000334490 PRPF38BQ5VTL8 546 aaKnown RBP14.4□□□□□ -0.1
C9orf47-201ENST00000334490 RSPO2Q6UXX9 243 aaPredicted RBP14.4□□□□□ -0.1
C9orf47-201ENST00000334490 PTERQ96BW5 349 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 RHBDF1Q96CC6 855 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 HIST1H2AAQ96QV6 131 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 C1orf21Q9H246 121 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 MEAF6Q9HAF1 191 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 A0A096LPI6 279 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 NPIPA5E9PKD4 350 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 SCO2O43819 266 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 CH25HO95992 272 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 CSTAP01040 98 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 RHDQ02161 417 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 TMEM107Q6UX40 140 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 LNX2Q8N448 690 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 ASPNQ9BXN1 380 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 BRD7Q9NPI1 651 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 IGSF5Q9NSI5 407 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 MCUBQ9NWR8 336 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 RHCGQ9UBD6 479 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 NPIPA1Q9UND3 350 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 ZFR2Q9UPR6 939 aaKnown RBP14.39□□□□□ -0.11
C9orf47-201ENST00000334490 POFUT2Q9Y2G5 429 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 KIR2DS5A0A0G2JLQ3 304 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 A0A0G2JNG1 304 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 A6NCN8 305 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 KIR2DS3K7RE56 304 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 CACNG3O60359 315 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 C9P02748 559 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 IFI30P13284 250 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 ACY1Q03154 408 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 KIR2DS5Q14953 304 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 G6PC3Q9BUM1 346 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 PRSS16Q9NQE7 514 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 DNMT3AQ9Y6K1 912 aaPredicted RBP14.39□□□□□ -0.11
C9orf47-201ENST00000334490 MYH7BA7E2Y1 1941 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 PTNP21246 168 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 FPR1P21462 350 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 NR4A1P22736 598 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 OR1E2P47887 323 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 MERTKQ12866 999 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 PERM1Q5SV97 790 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 DCP2Q8IU60 420 aaKnown RBP14.39□□□□□ -0.11
C9orf47-201ENST00000334490 ZSCAN1Q8NBB4 408 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 LPAR4Q99677 370 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 ACTR10Q9NZ32 417 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 TBX10O75333 385 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 CXCL10P02778 98 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 MAGEA6P43360 314 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 PPP2R2BQ00005 443 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 KCNC4Q03721 635 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 COMMD6Q7Z4G1 85 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 C6orf120Q7Z4R8 191 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 POC5Q8NA72 575 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 AQP11Q8NBQ7 271 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 COX4I2Q96KJ9 171 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 TRIM8Q9BZR9 551 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 UCK2Q9BZX2 261 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 TREX1Q9NSU2 369 aa14.39□□□□□ -0.11
C9orf47-201ENST00000334490 A0A1B0GUL6 1792 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 SNX4O95219 450 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 VLDLRP98155 873 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 MLF2Q15773 248 aaPredicted RBP14.38□□□□□ -0.11
C9orf47-201ENST00000334490 DNM1P34Q6PK57 102 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 HSDL2Q6YN16 418 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 OR7G3Q8NG95 312 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 OR13J1Q8NGT2 312 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 TMEM138Q9NPI0 162 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 PRSS38A1L453 326 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 TLR4O00206 839 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 FADDQ13158 208 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 SLC14A2Q15849 920 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 MAPK14Q16539 360 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 PARM1Q6UWI2 310 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 SLCO6A1Q86UG4 719 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 TREML1Q86YW5 311 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 CHFRQ96EP1 664 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 ZSWIM3Q96MP5 696 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 SMURF2Q9HAU4 748 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 DKK3Q9UBP4 350 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 LIPT1Q9Y234 373 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms