RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 ERICH5Q6P6B1 374 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 C19orf48Q6RUI8 117 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 FAM124AQ86V42 546 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 CIR1Q86X95 450 aaPredicted RBP17.4■□□□□ 0.38
PKP3-201ENST00000331563 GPALPP1Q8IXQ4 340 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 LGI4Q8N135 537 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 OR9Q1Q8NGQ5 310 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 TMEM203Q969S6 136 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 SECISBP2Q96T21 854 aaKnown RBP17.4■□□□□ 0.38
PKP3-201ENST00000331563 PAK6Q9NQU5 681 aaPredicted RBP17.4■□□□□ 0.38
PKP3-201ENST00000331563 MARCH5Q9NX47 278 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 NDRG2Q9UN36 371 aaKnown RBP17.4■□□□□ 0.38
PKP3-201ENST00000331563 POFUT2Q9Y2G5 429 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 PCDHGA2Q9Y5H1 932 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.39■□□□□ 0.38
PKP3-201ENST00000331563 LOC730098B7Z3J9 87 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 LINC01387J3KSC0 135 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 GLUD1P00367 558 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 PRKAR1AP10644 381 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 PTPN6P29350 595 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 MC4RP32245 332 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 CLDN8P56748 225 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 RRAS2P62070 204 aaPredicted RBP17.39■□□□□ 0.38
PKP3-201ENST00000331563 IKZF1Q13422 519 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 KCNC3Q14003 757 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 IQCCQ4KMZ1 466 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 ANKRD54Q6NXT1 300 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 UMODL1-AS1Q8N2C9 162 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 OR8K5Q8NH50 307 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 ST8SIA2Q92186 375 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 ST8SIA4Q92187 359 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 RIT1Q92963 219 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 QRFPRQ96P65 431 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 GALNT9Q9HCQ5 603 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 PRM3Q9NNZ6 103 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 FAM8A1Q9UBU6 413 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 SEC14L4Q9UDX3 406 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 VPS9D1Q9Y2B5 631 aa17.39■□□□□ 0.38
PKP3-201ENST00000331563 C2orf81A6NN90 581 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 MANBAO00462 879 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 IGLV3-25P01717 112 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 SEMG1P04279 462 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 SCG5P05408 212 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 TTPAP49638 278 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.39■□□□□ 0.374e-6■■■■□ 20.5
PKP3-201ENST00000331563 FANK1Q8TC84 345 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 NELL1Q92832 810 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 IL4I1Q96RQ9 567 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 TRIM62Q9BVG3 475 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 RNF208Q9H0X6 261 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 MIXL1Q9H2W2 232 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 CLEC2DQ9UHP7 191 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 XIRP2A4UGR9 3374 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 IQCMA0A1B0GVH7 501 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 SLC35F4A4IF30 521 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 ZNF670-ZNF695F2Z2N8 137 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 ITGALP20701 1170 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 CHMP24386 653 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 APEX1P27695 318 aaKnown RBP17.39■□□□□ 0.37
PKP3-201ENST00000331563 KIR3DL1P43629 444 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 CCT3P49368 545 aaKnown RBP17.39■□□□□ 0.37
PKP3-201ENST00000331563 TPMTP51580 245 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 S100A12P80511 92 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 ANGPT1Q15389 498 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 LIPKQ5VXJ0 399 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 ABI3BPQ7Z7G0 1075 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 TMEM151BQ8IW70 566 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 LILRB2Q8N423 598 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 C9orf62Q8N4C0 152 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 ZNF366Q8N895 744 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 OR9Q2Q8NGE9 314 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 C7orf34Q96L11 122 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 TAPBPLQ9BX59 468 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 ZYG11BQ9C0D3 744 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 POLR2J2Q9GZM3 115 aaKnown RBP17.39■□□□□ 0.37
PKP3-201ENST00000331563 ENOPH1Q9UHY7 261 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 FKBPLQ9UIM3 349 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 PPT2Q9UMR5 302 aa17.39■□□□□ 0.37
PKP3-201ENST00000331563 PRRC2BQ5JSZ5 2229 aaKnown RBP17.38■□□□□ 0.37
PKP3-201ENST00000331563 ORC5O43913 435 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 PROS1P07225 676 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 OR1E2P47887 323 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 TAF10Q12962 218 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 SPHARQ15513 63 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 Q8N402 240 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 BTN2A2Q8WVV5 523 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 RACGAP1Q9H0H5 632 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 STUB1Q9UNE7 303 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 MRPS7Q9Y2R9 242 aaKnown RBP17.38■□□□□ 0.37
PKP3-201ENST00000331563 FRMPD3Q5JV73 1810 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 H0YC42 278 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 ADAMDEC1O15204 470 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 GPR39O43194 453 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 RAMP2O60895 175 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 PTP4A3O75365 173 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 RFPL3O75679 317 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 OPN1SWP03999 348 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 ANXA8P13928 327 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 GABRB1P18505 474 aa17.38■□□□□ 0.37
PKP3-201ENST00000331563 GBX2P52951 348 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms