RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 OR52B6Q8NGF0 335 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 BCL7CQ8WUZ0 217 aaPredicted RBP8.05□□□□□ -1.12
SKA2-201ENST00000330137 ADAMTS14Q8WXS8 1223 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 CELF6Q96J87 481 aaKnown RBP8.05□□□□□ -1.12
SKA2-201ENST00000330137 NECTIN4Q96NY8 510 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 SLC38A2Q96QD8 506 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 NELL2Q99435 816 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 KATNB1Q9BVA0 655 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 SLC39A8Q9C0K1 460 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 ABCG4Q9H172 646 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 OR51J1Q9H342 316 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 IMP3Q9NV31 184 aaKnown RBP8.05□□□□□ -1.12
SKA2-201ENST00000330137 SLCO1C1Q9NYB5 712 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 KCMF1Q9P0J7 381 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 FTSJ1Q9UET6 329 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 EIF2B4Q9UI10 523 aaKnown RBP8.05□□□□□ -1.12
SKA2-201ENST00000330137 GABRQQ9UN88 632 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 MED16Q9Y2X0 877 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 PHIPQ8WWQ0 1821 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 RLFQ13129 1914 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 PRAMEF33A0A0G2JMD5 474 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 SLC22A23A1A5C7 686 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 TMEM88BA6NKF7 163 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 CBX4O00257 560 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 CDC7O00311 574 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 PRAMEF10O60809 474 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 ECDO95905 644 aaPredicted RBP8.04□□□□□ -1.12
SKA2-201ENST00000330137 FHP07954 510 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 ARF4P18085 180 aaPredicted RBP8.04□□□□□ -1.12
SKA2-201ENST00000330137 ITPKAP23677 461 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 DNASE1P24855 282 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 APEX1P27695 318 aaKnown RBP8.04□□□□□ -1.12
SKA2-201ENST00000330137 HTR6P50406 440 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 ZNF81P51508 661 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 SELENOWP63302 87 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 CACNB2Q08289 660 aaPredicted RBP8.04□□□□□ -1.12
SKA2-201ENST00000330137 PCBP1Q15365 356 aaKnown RBP eCLIP8.04□□□□□ -1.121e-6■■■■□ 22.1
SKA2-201ENST00000330137 SV2CQ496J9 727 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 FCRLBQ6BAA4 426 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 ZNF704Q6ZNC4 412 aaPredicted RBP8.04□□□□□ -1.12
SKA2-201ENST00000330137 QSOX2Q6ZRP7 698 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 CLEC20AQ6ZU45 233 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 MIB1Q86YT6 1006 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 CMIPQ8IY22 773 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 SLC5A8Q8N695 610 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 OR11H7Q8NGC8 314 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 UBTD2Q8WUN7 234 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 KCNJ9Q92806 393 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 INTS12Q96CB8 462 aaKnown RBP8.04□□□□□ -1.12
SKA2-201ENST00000330137 TBATAQ96M53 351 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 COQ10AQ96MF6 247 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 PPP1R16BQ96T49 567 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 TMPRSS13Q9BYE2 586 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 DNTTIP1Q9H147 329 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 DPAGT1Q9H3H5 408 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 SP110Q9HB58 689 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 TMLHEQ9NVH6 421 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 POMT2Q9UKY4 750 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 OGDHLQ9ULD0 1010 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 DSPPQ9NZW4 1301 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 TRAV19A0A0A6YYK7 116 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 TRDV1A0A1B0GX56 115 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 NPEPPSL1A6NEC2 478 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 ANKDD1BA6NHY2 528 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 ISM1B1AKI9 464 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 CLIC1O00299 241 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 WNT10BO00744 389 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 ULK1O75385 1050 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 IGLV3-25P01717 112 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 IFNA4P05014 189 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 ATXN1LP0C7T5 689 aaKnown RBP8.04□□□□□ -1.12
SKA2-201ENST00000330137 ITGALP20701 1170 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 GABRA5P31644 462 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 PCGF2P35227 344 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 HAAOP46952 286 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 LIMS1P48059 325 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 ZNF280AP59817 542 aaPredicted RBP8.04□□□□□ -1.12
SKA2-201ENST00000330137 PTGES3Q15185 160 aaKnown RBP8.04□□□□□ -1.12
SKA2-201ENST00000330137 SNAPC1Q16533 368 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 PTCHD3Q3KNS1 767 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 GTDC1Q4AE62 458 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 SIRPB2Q5JXA9 342 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 MRPL10Q7Z7H8 261 aaKnown RBP8.04□□□□□ -1.12
SKA2-201ENST00000330137 PTOV1Q86YD1 416 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 LINC01465Q8N7H1 131 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 RTL3Q8N8U3 475 aaKnown RBP8.04□□□□□ -1.12
SKA2-201ENST00000330137 TMIEQ8NEW7 156 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 OR11H4Q8NGC9 324 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 OR8D4Q8NGM9 314 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 OR8K3Q8NH51 312 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 SH3RF2Q8TEC5 729 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 RIT1Q92963 219 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 OTULINQ96BN8 352 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 KCTD12Q96CX2 325 aaKnown RBP8.04□□□□□ -1.12
SKA2-201ENST00000330137 GMLQ99445 158 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 C12orf57Q99622 126 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 MYOCQ99972 504 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 H2AFJQ9BTM1 129 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 PDGFCQ9NRA1 345 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 MRPS18AQ9NVS2 196 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms