RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 KLF13Q9Y2Y9 288 aaPredicted RBP12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 TSC22D4Q9Y3Q8 395 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 ZNF407Q9C0G0 2248 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 PHF3Q92576 2039 aaKnown RBP12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 LRBAP50851 2863 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 TRBV11-1A0A0K0K1C0 115 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 TGFBR3LH3BV60 316 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 ASNA1O43681 348 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 CTNSO60931 367 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 WISP2O76076 250 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 MYO1DO94832 1006 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 LTA4HP09960 611 aaKnown RBP12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 HNRNPFP52597 415 aaKnown RBP12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 ARFIP1P53367 373 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 PLA2G16P53816 162 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 IRF8Q02556 426 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 DLG1Q12959 904 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 SLC13A2Q13183 592 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 CHIT1Q13231 466 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 MAPKAPK3Q16644 382 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 TMEM35AQ53FP2 167 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 SP5Q6BEB4 398 aaPredicted RBP12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 XKRXQ6PP77 449 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 TBC1D1Q86TI0 1168 aaPredicted RBP12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 SPPL2CQ8IUH8 684 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 GPALPP1Q8IXQ4 340 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 LAS2Q8IYD9 372 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 GHDCQ8N2G8 530 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 TMEM132CQ8N3T6 1108 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 PPM1NQ8N819 430 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 SNX31Q8N9S9 440 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 TMEM52Q8NDY8 209 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 OR8K3Q8NH51 312 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 C16orf52Q8NHV5 167 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 FBF1Q8TES7 1133 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 ZNF473Q8WTR7 871 aaKnown RBP12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 ESAMQ96AP7 390 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 MAGED4Q96JG8 741 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 TBCDQ9BTW9 1192 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 MS4A8Q9BY19 250 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 COPS7BQ9H9Q2 264 aaPredicted RBP12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 KCMF1Q9P0J7 381 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 VTI1BQ9UEU0 232 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 ADGRE2Q9UHX3 823 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 YARS2Q9Y2Z4 477 aaKnown RBP12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 APCP25054 2843 aa12.66□□□□□ -0.38
GTF3C6-201ENST00000329970 A0A0G2JN53 185 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 SYCE1LA8MT33 242 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 PRSS44E7EML9 344 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 NPIPA5E9PKD4 350 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 KLRC4-KLRK1H3BQV0 150 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 K7EPI3 171 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 CCNT2O60583 730 aaKnown RBP12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 ZNF24P17028 368 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 CERS1P27544 350 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 SERTAD2Q14140 314 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 NAA30Q147X3 362 aaPredicted RBP12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 SLMAPQ14BN4 828 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 C3AR1Q16581 482 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 FBXO48Q5FWF7 155 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 ADNP2Q6IQ32 1131 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 RAPH1Q70E73 1250 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 UBE3DQ7Z6J8 389 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 CMC1Q7Z7K0 106 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 MRGPRGQ86SM5 289 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 FAM47BQ8NA70 645 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 MORN4Q8NDC4 146 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 PHF10Q8WUB8 498 aaKnown RBP12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 DAZLQ92904 295 aaKnown RBP12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 NCLNQ969V3 563 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 CCDC77Q9BR77 488 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 ALG9Q9H6U8 611 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 RUBCNLQ9H714 662 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 CHST11Q9NPF2 352 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 PNO1Q9NRX1 252 aaKnown RBP12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 IGSF5Q9NSI5 407 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 RYDENQ9NUL5 291 aaKnown RBP12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 NPIPA1Q9UND3 350 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 ASB1Q9Y576 335 aa12.65□□□□□ -0.38
GTF3C6-201ENST00000329970 A0A087X1B8 175 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 A8MUA0 341 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 KLK8O60259 260 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 UGDHO60701 494 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 ITGA10O75578 1167 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 FAM155BO75949 473 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 ZFAND5O76080 213 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 MTHFD2P13995 350 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 ATP5A1P25705 553 aaKnown RBP12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 IGLV3-21P80748 117 aaPredicted RBP12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 ADORA2A-AS1P86434 159 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 SRSF11Q05519 484 aaKnown RBP12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 CKAP4Q07065 602 aaKnown RBP12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 BIKQ13323 160 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 ZNF630Q2M218 657 aaPredicted RBP12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 GRHL2Q6ISB3 625 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 METTL2BQ6P1Q9 378 aaKnown RBP12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 MED27Q6P2C8 311 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 SYT10Q6XYQ8 523 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 ZNF793Q6ZN11 406 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms