RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 C3P1Q6ZMU1 363 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 SHFQ7M4L6 423 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 UNC93AQ86WB7 457 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 Q8N402 240 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 NT5C3BQ969T7 300 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 TSPAN17Q96FV3 270 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 SPATA33Q96N06 139 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 SFXN2Q96NB2 322 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 H2AFJQ9BTM1 129 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 ZNF408Q9H9D4 720 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 CDHR5Q9HBB8 845 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 TMEM45AQ9NWC5 275 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 PTTG3PQ9NZH4 202 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 BTRCQ9Y297 605 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 ASB4Q9Y574 426 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 PCDHGC4Q9Y5F7 938 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 PCDHGB7Q9Y5F8 929 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 PCDHGA6Q9Y5G7 932 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 PCDHGA5Q9Y5G8 931 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 PCDHGA1Q9Y5H4 931 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 DNAJC15Q9Y5T4 150 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 SMIM30A4D0T7 59 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 GRXCR2A6NFK2 248 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 GSTA4O15217 222 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 CACNG3O60359 315 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 VPS4BO75351 444 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 RASGRP1O95267 797 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 PRAMEF1O95521 474 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 CYP17A1P05093 508 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 UFM1P61960 85 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 SNRPEP62304 92 aaKnown RBP11.37□□□□□ -0.59
SHMT2-201ENST00000328923 SLC3A1Q07837 685 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 RCAN2Q14206 197 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 PFKFB4Q16877 469 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 FAM187BQ17R55 369 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 Q6ZPB1 254 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-201ENST00000328923 ACOT1Q86TX2 421 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 MIB1Q86YT6 1006 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 DENND6AQ8IWF6 608 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 RBM18Q96H35 190 aaKnown RBP11.37□□□□□ -0.59
SHMT2-201ENST00000328923 DMRTA2Q96SC8 542 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 PKMYT1Q99640 499 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 ZCCHC2Q9C0B9 1178 aaKnown RBP11.37□□□□□ -0.59
SHMT2-201ENST00000328923 PRMT7Q9NVM4 692 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-201ENST00000328923 EPHA6Q9UF33 1036 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 LOC390937A0A1W2PQ73 354 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 FAM234BA2RU67 622 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 ZBTB42B2RXF5 422 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 PER2O15055 1255 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 EGFP01133 1207 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 OR56A5P0C7T3 313 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 EIF2S3P41091 472 aaKnown RBP11.37□□□□□ -0.59
SHMT2-201ENST00000328923 SLC1A2P43004 574 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 PTGFRP43088 359 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 ACTR1AP61163 376 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 DEFA6Q01524 100 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 CSHL1Q14406 222 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 UGT8Q16880 541 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 TIMM50Q3ZCQ8 353 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 CARD16Q5EG05 197 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 FAM76BQ5HYJ3 339 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 ZNF678Q5SXM1 525 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 OTUD1Q5VV17 481 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-201ENST00000328923 KIAA1614Q5VZ46 1190 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 PDE12Q6L8Q7 609 aaKnown RBP11.37□□□□□ -0.59
SHMT2-201ENST00000328923 SHQ1Q6PI26 577 aaKnown RBP11.37□□□□□ -0.59
SHMT2-201ENST00000328923 PLPPR4Q7Z2D5 763 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 TMEM130Q8N3G9 435 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 FTMTQ8N4E7 242 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 DNAJC22Q8N4W6 341 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 IPMKQ8NFU5 416 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 GLYATL2Q8WU03 294 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 C11orf24Q96F05 449 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-201ENST00000328923 COL21A1Q96P44 957 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 PDCD10Q9BUL8 212 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 QRSL1Q9H0R6 528 aaKnown RBP11.37□□□□□ -0.59
SHMT2-201ENST00000328923 PDGFCQ9NRA1 345 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 KRT84Q9NSB2 600 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 GHRLQ9UBU3 117 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 LEF1Q9UJU2 399 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-201ENST00000328923 SSR3Q9UNL2 185 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 SAMHD1Q9Y3Z3 626 aaKnown RBP11.37□□□□□ -0.59
SHMT2-201ENST00000328923 TSC2P49815 1807 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 PLXNA1Q9UIW2 1896 aa11.37□□□□□ -0.59
SHMT2-201ENST00000328923 IQCMA0A1B0GVH7 501 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 SIX6O95475 246 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 S100A8P05109 93 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 LINC00032P0C843 101 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 TXNP10599 105 aaKnown RBP11.36□□□□□ -0.59
SHMT2-201ENST00000328923 LBPP18428 481 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 PVALBP20472 110 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-201ENST00000328923 FOXA1P55317 472 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 ZNF33AQ06730 810 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 CTBP1Q13363 440 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 OPCMLQ14982 345 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 P2RY14Q15391 338 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 SSX2Q16385 188 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 EIF2S3LQ2VIR3 472 aaKnown RBP11.36□□□□□ -0.59
SHMT2-201ENST00000328923 SLC10A6Q3KNW5 377 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 KIAA0930Q6ICG6 404 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms