RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 CA13Q8N1Q1 262 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 C1orf52Q8N6N3 182 aaKnown RBP4.89□□□□□ -1.63
LRIT3-201ENST00000327908 IL22RA1Q8N6P7 574 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 EFCAB3Q8N7B9 438 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 C17orf47Q8NEP4 570 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 OR52B6Q8NGF0 335 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 M1APQ8TC57 530 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 SORT1Q99523 831 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 ADNPQ9H2P0 1102 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 MUC13Q9H3R2 512 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 SAR1AQ9NR31 198 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 POLE3Q9NRF9 147 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 LEF1Q9UJU2 399 aaPredicted RBP4.89□□□□□ -1.63
LRIT3-201ENST00000327908 ZDBF2Q9HCK1 2354 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 LSM1O15116 133 aaKnown RBP4.89□□□□□ -1.63
LRIT3-201ENST00000327908 CHST10O43529 356 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 ERN1O75460 977 aaKnown RBP4.89□□□□□ -1.63
LRIT3-201ENST00000327908 ALPPP05187 535 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 ZCCHC18P0CG32 403 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 PVRP15151 417 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 BSGP35613 385 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 CASRP41180 1078 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 TMPRSS3P57727 454 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 RPL38P63173 70 aaKnown RBP4.89□□□□□ -1.63
LRIT3-201ENST00000327908 STX4Q12846 297 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 SLAMF1Q13291 335 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 UGT8Q16880 541 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 UGT3A2Q3SY77 523 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 CPTPQ5TA50 214 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 FAM71E1Q6IPT2 247 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 HACD2Q6Y1H2 254 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 TTLL10Q6ZVT0 673 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 ST13P4Q8IZP2 240 aaPredicted RBP4.89□□□□□ -1.63
LRIT3-201ENST00000327908 ZNF781Q8N8C0 355 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 TMEM102Q8N9M5 508 aaPredicted RBP4.89□□□□□ -1.63
LRIT3-201ENST00000327908 BHLHE22Q8NFJ8 381 aaPredicted RBP4.89□□□□□ -1.63
LRIT3-201ENST00000327908 C16orf78Q8WTQ4 265 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 WBP1Q96G27 269 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 C10orf90Q96M02 699 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 LPAR4Q99677 370 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 ACPTQ9BZG2 426 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 PRDM7Q9NQW5 492 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 C5AR2Q9P296 337 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 TRPC4Q9UBN4 977 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 ZDHHC2Q9UIJ5 367 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 TUBD1Q9UJT1 453 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 DNAJC15Q9Y5T4 150 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 LOC102723996A0A087X1L8 192 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 DUXAA6NLW8 204 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 RNASET2O00584 256 aaKnown RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 FFAR3O14843 346 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 SCAMP2O15127 329 aaKnown RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 GPR42O15529 346 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 OR10H2O60403 315 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ALOX12BO75342 701 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 TOP3BO95985 862 aaKnown RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 PORP16435 677 aaPredicted RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 NAGAP17050 411 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 KIR3DL1P43629 444 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 PDE7AQ13946 482 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 MPP2Q14168 576 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 PDCD2Q16342 344 aaPredicted RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 C6orf136Q5SQH8 315 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ZNF517Q6ZMY9 492 aaPredicted RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 LRRC25Q8N386 305 aaPredicted RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 C2orf73Q8N5S3 287 aaPredicted RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 HORMAD2Q8N7B1 307 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ANKRD53Q8N9V6 530 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 LSM14AQ8ND56 463 aaKnown RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 OR8J2Q8NGG1 315 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 OR51Q1Q8NH59 317 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 VMP1Q96GC9 406 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 RNF145Q96MT1 663 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 NSUN5Q96P11 429 aaKnown RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 CRB3Q9BUF7 120 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 MECRQ9BV79 373 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 UNKQ9C0B0 810 aaKnown RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 VPS4AQ9UN37 437 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 NAALAD2Q9Y3Q0 740 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 FCHO1O14526 889 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 SLC22A3O75751 556 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 TGFB1P01137 390 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 MMP11P24347 488 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 GMPRP36959 345 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 STT3AP46977 705 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 CLK3P49761 638 aaKnown RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 PDX1P52945 283 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 AQP5P55064 265 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 C2orf80Q0P641 193 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 CYLC2Q14093 348 aaPredicted RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 KRT72Q14CN4 511 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 SGO1Q5FBB7 561 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 PRAMEF8Q5VWM4 474 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 PRAMEF7Q5VXH5 474 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 HLA-DQA1Q5Y7H0 255 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ZNF385CQ66K41 422 aaPredicted RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 SLC48A1Q6P1K1 146 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 LARP4Q71RC2 724 aaKnown RBP eCLIP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 SCUBE1Q8IWY4 988 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 TAGAPQ8N103 731 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms