RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 GASTP01350 101 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 NR2F1P10589 423 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 IL1RNP18510 177 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 TGM4P49221 684 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 CSNK2BP67870 215 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 RAE1P78406 368 aaKnown RBP12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 DMPKQ09013 629 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 KRT33BQ14525 404 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 CDKL4Q5MAI5 379 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 DCST1Q5T197 706 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 LIPKQ5VXJ0 399 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 HTR3DQ70Z44 454 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 SLC46A3Q7Z3Q1 461 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 PLPP6Q8IY26 295 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 SLC39A11Q8N1S5 342 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 OXR1Q8N573 874 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 F2RL3Q96RI0 385 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 PIP5K1AQ99755 562 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 SLC6A16Q9GZN6 736 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 POLR2J3Q9H1A7 115 aaKnown RBP12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 SPATA6Q9NWH7 488 aaPredicted RBP12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 SLC13A4Q9UKG4 626 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 PCDHGB6Q9Y5F9 930 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 PEX16Q9Y5Y5 336 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 FEZF1A0PJY2 475 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 SLC16A5O15375 505 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 SSX4O60224 188 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 MMP20O60882 483 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 ENTPD6O75354 484 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 BUD31P41223 144 aaPredicted RBP12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 SLC15A1P46059 708 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 TM4SF4P48230 202 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 METAP1P53582 386 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 UGT2B15P54855 530 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 TMIGD1Q6UXZ0 262 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 RRM2BQ7LG56 351 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 HOMEZQ8IX15 550 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 METTL4Q8N3J2 472 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 MINDY2Q8NBR6 621 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 OR52N2Q8NGI0 321 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 IRF7Q92985 503 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 ASPNQ9BXN1 380 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 BEX2Q9BXY8 128 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 EQTNQ9NQ60 294 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 GULP1Q9UBP9 304 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 BTNL2Q9UIR0 455 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 HS3ST2Q9Y278 367 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 TRBV4-1A0A0J9YWV2 114 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 K7ESM1 405 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 TLX2O43763 284 aaPredicted RBP12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 POP7O75817 140 aaKnown RBP12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 PTPN5P54829 565 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 C1DQ13901 141 aaKnown RBP12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 LSRQ86X29 649 aaPredicted RBP12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 RBM45Q8IUH3 476 aaKnown RBP12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 SLC5A11Q8WWX8 675 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 CDADC1Q9BWV3 514 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 EHD1Q9H4M9 534 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 ZNF226Q9NYT6 803 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 CLEC2DQ9UHP7 191 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 H0YIV9 168 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 GREM1O60565 184 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 CSF2P04141 144 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 C1GALT1C1LP0DN25 315 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 TIMP2P16035 220 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 ZNF30P17039 623 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 CHMP24386 653 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 PSMA1P25786 263 aaKnown RBP12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 CRYBA2P53672 197 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 CRISP1P54107 249 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 NKX3-2P78367 333 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 FNDC3BQ53EP0 1204 aaKnown RBP12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 SLCO4C1Q6ZQN7 724 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 SCAIQ8N9R8 606 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 C1GALT1C1Q96EU7 318 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 MCCC1Q96RQ3 725 aaPredicted RBP12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 LYSMD1Q96S90 227 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 ABCG4Q9H172 646 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 IL36AQ9UHA7 158 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 OSGIN1Q9UJX0 560 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 KLHL20Q9Y2M5 609 aa12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 WBP11Q9Y2W2 641 aaKnown RBP12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 DNMT3AQ9Y6K1 912 aaPredicted RBP12.32□□□□□ -0.44
HMGCS1-201ENST00000325110 EIF3FO00303 357 aaPredicted RBP12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 CCRL2O00421 344 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 IDH3BO43837 385 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 TMCC2O75069 709 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 TCEA1P23193 301 aaKnown RBP12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 PIK3CBP42338 1070 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 SELENBP1Q13228 472 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 UBE2UQ5VVX9 321 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 TRNT1Q96Q11 434 aaKnown RBP12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 BCL7BQ9BQE9 202 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 EFCAB11Q9BUY7 163 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 PRRG3Q9BZD7 231 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 KCNK12Q9HB15 430 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 TDP1Q9NUW8 608 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 ANKMY1Q9P2S6 941 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 STOML2Q9UJZ1 356 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 TANC1Q9C0D5 1861 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms