RNA–Protein interactions for RNA: ENST00000323977.7

MRE11-202, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-202ENST00000323977 CRTC3Q6UUV7 619 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 LRRN1Q6UXK5 716 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 CCNI2Q6ZMN8 369 aaPredicted RBP4.3□□□□□ -1.72
MRE11-202ENST00000323977 USP30Q70CQ3 517 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 SPRED1Q7Z699 444 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 CTAGE3PQ8IX95 158 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 ZNF34Q8IZ26 560 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 ADGRF4Q8IZF3 695 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 C4orf33Q8N1A6 199 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 BATF2Q8N1L9 274 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 BEND7Q8N7W2 519 aaPredicted RBP4.3□□□□□ -1.72
MRE11-202ENST00000323977 PDPRQ8NCN5 879 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 OR4D6Q8NGJ1 314 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 P2RX5Q93086 422 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 NEIL1Q96FI4 390 aaPredicted RBP4.3□□□□□ -1.72
MRE11-202ENST00000323977 TXNDC15Q96J42 360 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 MAGEB10Q96LZ2 347 aaPredicted RBP4.3□□□□□ -1.72
MRE11-202ENST00000323977 EBNA1BP2Q99848 306 aaKnown RBP4.3□□□□□ -1.72
MRE11-202ENST00000323977 ALKBH7Q9BT30 221 aaPredicted RBP4.3□□□□□ -1.72
MRE11-202ENST00000323977 NPLQ9BXD5 320 aaPredicted RBP4.3□□□□□ -1.72
MRE11-202ENST00000323977 WDR11Q9BZH6 1224 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 ROGDIQ9GZN7 287 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 RIOX1Q9H6W3 641 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 AUNIPQ9H7T9 357 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 DCLRE1BQ9H816 532 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 NIT2Q9NQR4 276 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 MRPL22Q9NWU5 206 aaKnown RBP4.3□□□□□ -1.72
MRE11-202ENST00000323977 AHSPQ9NZD4 102 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 NDUFAF4Q9P032 175 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 ARPP21Q9UBL0 812 aaPredicted RBP4.3□□□□□ -1.72
MRE11-202ENST00000323977 NXF1Q9UBU9 619 aaKnown RBP4.3□□□□□ -1.72
MRE11-202ENST00000323977 SERGEFQ9UGK8 458 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 ADAM30Q9UKF2 790 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 NFU1Q9UMS0 254 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 ST3GAL5Q9UNP4 418 aa4.3□□□□□ -1.72
MRE11-202ENST00000323977 POLR3HQ9Y535 204 aaPredicted RBP4.3□□□□□ -1.72
MRE11-202ENST00000323977 FLNBO75369 2602 aaKnown RBP4.3□□□□□ -1.72
MRE11-202ENST00000323977 TRAV25A0A0B4J276 109 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 A0A0G2JLL6 359 aaPredicted RBP4.29□□□□□ -1.72
MRE11-202ENST00000323977 TCRBV16S1A1N1A0A5B0 115 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 CLCA1A8K7I4 914 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 SMLR1H3BR10 107 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 M0QYV0 167 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 TLR4O00206 839 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 HAS3O00219 553 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 ZNF185O15231 689 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 FLRT2O43155 660 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 RGS10O43665 173 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 UGT1A9O60656 530 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 GLCEO94923 617 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 SNRPB2P08579 225 aaKnown RBP4.29□□□□□ -1.72
MRE11-202ENST00000323977 MELTFP08582 738 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 TRIM49P0CI25 452 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 TRIM49CP0CI26 452 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 CTSAP10619 480 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 MBL2P11226 248 aaPredicted RBP4.29□□□□□ -1.72
MRE11-202ENST00000323977 JUNBP17275 347 aaPredicted RBP4.29□□□□□ -1.72
MRE11-202ENST00000323977 GLDCP23378 1020 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 DCKP27707 260 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 GTF2E2P29084 291 aaKnown RBP4.29□□□□□ -1.72
MRE11-202ENST00000323977 CD80P33681 288 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 THBS4P35443 961 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 PREPP48147 710 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 KHKP50053 298 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 ADPRHP54922 357 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 CDH13P55290 713 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 NUTF2P61970 127 aaKnown RBP4.29□□□□□ -1.72
MRE11-202ENST00000323977 PPP2CBP62714 309 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 PPP2CAP67775 309 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 RPL6Q02878 288 aaKnown RBP4.29□□□□□ -1.72
MRE11-202ENST00000323977 SPP2Q13103 211 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 MYO9BQ13459 2157 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 AQP6Q13520 282 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 KRR1Q13601 381 aaKnown RBP4.29□□□□□ -1.72
MRE11-202ENST00000323977 ZNF273Q14593 569 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 PTGR1Q14914 329 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 PDK3Q15120 406 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 SGCBQ16585 318 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 CALCRLQ16602 461 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 BAK1Q16611 211 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 PDK4Q16654 411 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 GUK1Q16774 197 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 SPRED3Q2MJR0 410 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 HP1BP3Q5SSJ5 553 aaPredicted RBP4.29□□□□□ -1.72
MRE11-202ENST00000323977 PRAMEF19Q5SWL8 479 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 N4BP2L1Q5TBK1 243 aaPredicted RBP4.29□□□□□ -1.72
MRE11-202ENST00000323977 PEAR1Q5VY43 1037 aaPredicted RBP4.29□□□□□ -1.72
MRE11-202ENST00000323977 FRMPD2BQ6IN97 320 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 WDR88Q6ZMY6 472 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 RBM44Q6ZP01 1051 aaKnown RBP4.29□□□□□ -1.72
MRE11-202ENST00000323977 CFAP77Q6ZQR2 320 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 BBS12Q6ZW61 710 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 SLC35D2Q76EJ3 337 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 PRRT2Q7Z6L0 340 aaPredicted RBP4.29□□□□□ -1.72
MRE11-202ENST00000323977 WDR5BQ86VZ2 330 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 CADM2Q8N3J6 435 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 WDSUB1Q8N9V3 476 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 L3MBTL4Q8NA19 623 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 POC5Q8NA72 575 aa4.29□□□□□ -1.72
MRE11-202ENST00000323977 TP53I13Q8NBR0 393 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms