RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 OR4L1Q8NH43 312 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 LINC01560Q8TB33 94 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 HEXDCQ8WVB3 486 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 SREK1Q8WXA9 508 aaKnown RBP6.21□□□□□ -1.42
CSTF3-201ENST00000323959 LPGAT1Q92604 370 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 ULK4Q96C45 1275 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 L3HYPDHQ96EM0 354 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 SCRN2Q96FV2 425 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 TNFRSF13CQ96RJ3 184 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 TRMOQ9BU70 441 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 ANGPTL4Q9BY76 406 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 IQCGQ9H095 443 aaKnown RBP6.21□□□□□ -1.42
CSTF3-201ENST00000323959 PPANQ9NQ55 473 aaKnown RBP6.21□□□□□ -1.42
CSTF3-201ENST00000323959 SAR1AQ9NR31 198 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 IARS2Q9NSE4 1012 aaKnown RBP6.21□□□□□ -1.42
CSTF3-201ENST00000323959 TMEM45AQ9NWC5 275 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 OXSMQ9NWU1 459 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 IL1RAPL1Q9NZN1 696 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 SLC17A7Q9P2U7 560 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 MTO1Q9Y2Z2 717 aaKnown RBP6.21□□□□□ -1.42
CSTF3-201ENST00000323959 TESMINQ9Y4I5 508 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 PCDHGB1Q9Y5G3 927 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 FAM215AQ9Y5M1 114 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 USH1CQ9Y6N9 552 aa6.21□□□□□ -1.42
CSTF3-201ENST00000323959 A0A096LNT2 108 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 FAM95CA0A1B0GW59 222 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 SH3D21A4FU49 640 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 SMIM23A6NLE4 172 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 CCT8L1PA6NM43 557 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 TGFBR3LH3BV60 316 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 QSOX1O00391 747 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 CD3EAPO15446 510 aaKnown RBP6.2□□□□□ -1.42
CSTF3-201ENST00000323959 NME2P1O60361 137 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 DCTN3O75935 186 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 C2P06681 752 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 RBP1P09455 135 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 COX6A1P12074 109 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 PCSK2P16519 638 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 STMN1P16949 149 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 NME2P22392 152 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 SERPINA4P29622 427 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 SEC24CP53992 1094 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 DSCR9P59020 149 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 ATP6V0D1P61421 351 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 CRADDP78560 199 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 TIAL1Q01085 375 aaKnown RBP eCLIP6.2□□□□□ -1.424e-7■■■■□ 24.1
CSTF3-201ENST00000323959 SCGB2A2Q13296 93 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 GBX1Q14549 363 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 KRT72Q14CN4 511 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 OR1C1Q15619 314 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 CNGA3Q16281 694 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 KCTD19Q17RG1 926 aaPredicted RBP6.2□□□□□ -1.42
CSTF3-201ENST00000323959 ZC3H12BQ5HYM0 836 aaKnown RBP6.2□□□□□ -1.42
CSTF3-201ENST00000323959 ARMC12Q5T9G4 340 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 CHST15Q7LFX5 561 aaPredicted RBP6.2□□□□□ -1.42
CSTF3-201ENST00000323959 CPLX4Q7Z7G2 160 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 SDCCAG8Q86SQ7 713 aaPredicted RBP6.2□□□□□ -1.42
CSTF3-201ENST00000323959 CENPLQ8N0S6 344 aaPredicted RBP6.2□□□□□ -1.42
CSTF3-201ENST00000323959 DYDC1Q8WWB3 177 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 KAT2AQ92830 837 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 AARSD1Q9BTE6 412 aaKnown RBP6.2□□□□□ -1.42
CSTF3-201ENST00000323959 PITPNM3Q9BZ71 974 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 DERL2Q9GZP9 239 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 ATG10Q9H0Y0 220 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 MYLK2Q9H1R3 596 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 TFB2MQ9H5Q4 396 aaKnown RBP6.2□□□□□ -1.42
CSTF3-201ENST00000323959 CATSPERZQ9NTU4 200 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 ZNF711Q9Y462 761 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 PTGDR2Q9Y5Y4 395 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 CCDC88CQ9P219 2028 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 A0A096LPK6 155 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 ANKRD33BA6NCL7 494 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 VSTM2BA6NLU5 285 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 ZNHIT1O43257 154 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 DNAJC8O75937 253 aaPredicted RBP6.2□□□□□ -1.42
CSTF3-201ENST00000323959 VAPBO95292 243 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 F10P00742 488 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 ESR1P03372 595 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 SBK3P0C264 359 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 ZNF16P17020 682 aaPredicted RBP6.2□□□□□ -1.42
CSTF3-201ENST00000323959 TYK2P29597 1187 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 ALDH3A1P30838 453 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 POU6F1Q14863 301 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 TECRLQ5HYJ1 363 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 MROH9Q5TGP6 573 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 YOD1Q5VVQ6 348 aaPredicted RBP6.2□□□□□ -1.42
CSTF3-201ENST00000323959 SLC22A9Q8IVM8 553 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 KLHDC8AQ8IYD2 350 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 NETO2Q8NC67 525 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 KCNJ9Q92806 393 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 ZNF778Q96MU6 729 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 VPS35Q96QK1 796 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 TIMM29Q9BSF4 260 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 MCM8Q9UJA3 840 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 POMT2Q9UKY4 750 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 ACOT9Q9Y305 439 aa6.2□□□□□ -1.42
CSTF3-201ENST00000323959 VWFP04275 2813 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 MAN1A2O60476 641 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 SPAG7O75391 227 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 PIGNO95427 931 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms