RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 HSPB3Q12988 150 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 FADDQ13158 208 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 NEDD8Q15843 81 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 RPE65Q16518 533 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 KCTD8Q6ZWB6 473 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 UBE3DQ7Z6J8 389 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 ATG16L2Q8NAA4 619 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 PIK3C3Q8NEB9 887 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 ADAMTS16Q8TE57 1224 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 UCN3Q969E3 161 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 QRFPRQ96P65 431 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 YTHDF1Q9BYJ9 559 aaKnown RBP7.21□□□□□ -1.26
IFT88-201ENST00000319980 NLNQ9BYT8 704 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 PREBQ9HCU5 417 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 VCX3AQ9NNX9 186 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 THUMPD1Q9NXG2 353 aaKnown RBP7.21□□□□□ -1.26
IFT88-201ENST00000319980 SPHK1Q9NYA1 384 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 PTTG2Q9NZH5 202 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 TBC1D29Q9UFV1 150 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 ICKQ9UPZ9 632 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 LRIT2A6NDA9 550 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 PRR19A6NJB7 356 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 WASHC1A8K0Z3 465 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 ANHXE9PGG2 379 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 SH3BP5O60239 455 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 KRT75O95678 551 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 EML2O95834 649 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 FPR1P21462 350 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 PKLRP30613 574 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 SLC5A2P31639 672 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 GRK3P35626 688 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 SSR2P43308 183 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 ISL1P61371 349 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 CTBSQ01459 385 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 CD47Q08722 323 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 PMS2P3Q13401 168 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 LSAMPQ13449 338 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 RFX4Q33E94 735 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 IQCCQ4KMZ1 466 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 OR4C11Q6IEV9 310 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 WASH2PQ6VEQ5 465 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 SLC44A2Q8IWA5 706 aaPredicted RBP7.21□□□□□ -1.26
IFT88-201ENST00000319980 FBXL6Q8N531 539 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 SMYD1Q8NB12 490 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 OR4E2Q8NGC2 313 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 OR2L8Q8NGY9 312 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 CCL4L1Q8NHW4 92 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 SGCDQ92629 289 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 TSACCQ96A04 125 aaPredicted RBP7.21□□□□□ -1.26
IFT88-201ENST00000319980 TBC1D20Q96BZ9 403 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 TEFMQ96QE5 360 aaKnown RBP7.21□□□□□ -1.26
IFT88-201ENST00000319980 DPH7Q9BTV6 452 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 NPLQ9BXD5 320 aaPredicted RBP7.21□□□□□ -1.26
IFT88-201ENST00000319980 PITHD1Q9GZP4 211 aaPredicted RBP7.21□□□□□ -1.26
IFT88-201ENST00000319980 RIBC2Q9H4K1 309 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 KLHL31Q9H511 634 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 MVB12BQ9H7P6 319 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 LIN28AQ9H9Z2 209 aaKnown RBP7.21□□□□□ -1.26
IFT88-201ENST00000319980 FBRSQ9HAH7 460 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 SH3GLB1Q9Y371 365 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 TRIOO75962 3097 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 GLOD5A6NK44 160 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 PDPK1O15530 556 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 KCNJ13O60928 360 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 AGXTP21549 392 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 CD72P21854 359 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 UQCRC2P22695 453 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 CRHBPP24387 322 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 SERPINB1P30740 379 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 RRM2P31350 389 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 BCL6P41182 706 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 ITGA1P56199 1179 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 TFF2Q03403 129 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 RBBP4Q09028 425 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 FOXD4Q12950 439 aaPredicted RBP7.2□□□□□ -1.26
IFT88-201ENST00000319980 RAPSNQ13702 412 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 LRRC32Q14392 662 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 CTU2Q2VPK5 515 aaKnown RBP7.2□□□□□ -1.26
IFT88-201ENST00000319980 C6orf141Q5SZD1 244 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 TPRG1LQ5T0D9 272 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 KDM4DQ6B0I6 523 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 TNFAIP8L2Q6P589 184 aaPredicted RBP7.2□□□□□ -1.26
IFT88-201ENST00000319980 TMEM92Q6UXU6 159 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 CEACAM20Q6UY09 585 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 PIWIL3Q7Z3Z3 882 aaKnown RBP7.2□□□□□ -1.26
IFT88-201ENST00000319980 SZRD1Q7Z422 152 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 CLVS1Q8IUQ0 354 aaPredicted RBP7.2□□□□□ -1.26
IFT88-201ENST00000319980 OR2L3Q8NG85 312 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 RPLP0P6Q8NHW5 317 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 CREB3L4Q8TEY5 395 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 LZICQ8WZA0 190 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 OR1E3Q8WZA6 343 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 TAMM41Q96BW9 452 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 OR2M4Q96R27 311 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 RAB11FIP5Q9BXF6 653 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 TTYH1Q9H313 450 aaPredicted RBP7.2□□□□□ -1.26
IFT88-201ENST00000319980 TMEM38AQ9H6F2 299 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 NT5DC2Q9H857 520 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 CXorf21Q9HAI6 301 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 NDUFAF4Q9P032 175 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms