RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 MMP12P39900 470 aa14.89□□□□□ -0.03
SHROOM1-201ENST00000319854 SLC15A1P46059 708 aa14.89□□□□□ -0.03
SHROOM1-201ENST00000319854 CYP4F2P78329 520 aa14.89□□□□□ -0.03
SHROOM1-201ENST00000319854 SMU1Q2TAY7 513 aa14.89□□□□□ -0.03
SHROOM1-201ENST00000319854 VN1R5Q7Z5H4 357 aa14.89□□□□□ -0.03
SHROOM1-201ENST00000319854 CCDC190Q86UF4 302 aa14.89□□□□□ -0.03
SHROOM1-201ENST00000319854 TSPYL5Q86VY4 417 aaPredicted RBP14.89□□□□□ -0.03
SHROOM1-201ENST00000319854 ANKK1Q8NFD2 765 aa14.89□□□□□ -0.03
SHROOM1-201ENST00000319854 OR7G3Q8NG95 312 aa14.89□□□□□ -0.03
SHROOM1-201ENST00000319854 SMG7Q92540 1137 aaKnown RBP14.89□□□□□ -0.03
SHROOM1-201ENST00000319854 APOL4Q9BPW4 351 aa14.89□□□□□ -0.03
SHROOM1-201ENST00000319854 CCM2Q9BSQ5 444 aa14.89□□□□□ -0.03
SHROOM1-201ENST00000319854 GULP1Q9UBP9 304 aa14.89□□□□□ -0.03
SHROOM1-201ENST00000319854 ZNF451Q9Y4E5 1061 aa14.89□□□□□ -0.03
SHROOM1-201ENST00000319854 PCYT1BQ9Y5K3 369 aaPredicted RBP14.89□□□□□ -0.03
SHROOM1-201ENST00000319854 EFCAB14O75071 495 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 EPN2O95208 641 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 RETP07949 1114 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 GSTM1P09488 218 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 MAPK1P28482 360 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 PTPN6P29350 595 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 IFNA8P32881 189 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 NRIP1P48552 1158 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 TBPL1P62380 186 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 YIF1BQ5BJH7 314 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 ZDHHC20Q5W0Z9 365 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 ZNF517Q6ZMY9 492 aaPredicted RBP14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 BPHLQ86WA6 291 aaPredicted RBP14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 ZNF480Q8WV37 535 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 PHOX2BQ99453 314 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 PRRG3Q9BZD7 231 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 MMP28Q9H239 520 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 ACSL6Q9UKU0 697 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 DOCK9Q9BZ29 2069 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 GABRR3A8MPY1 467 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 LOC110117498-PIK3R3F6TDL0 507 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 MPC1LP0DKB6 136 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 GZMMP51124 257 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 NUDT6P53370 316 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 KLK6Q92876 244 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 NECTIN4Q96NY8 510 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 RAD9AQ99638 391 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 CCNB1IP1Q9NPC3 277 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 SPASTQ9UBP0 616 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 PRELID1Q9Y255 219 aa14.88□□□□□ -0.03
SHROOM1-201ENST00000319854 TRBV5-3A0A0A0MS03 114 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 TBC1D3BA6NDS4 549 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 MEN1O00255 615 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 KPNA5O15131 536 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 LATO43561 262 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 STATHP02808 62 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 HTR2BP41595 481 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 SPANXN2Q5MJ10 180 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 FAM109BQ6ICB4 259 aaPredicted RBP14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 MMP21Q8N119 569 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 NATD1Q8N6N6 113 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 SPNS1Q9H2V7 528 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 MAGIXQ9H6Y5 334 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 RPRD1BQ9NQG5 326 aaKnown RBP14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 TM7SF3Q9NS93 570 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 NUFIP1Q9UHK0 495 aaKnown RBP14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 MAFFQ9ULX9 164 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 HSPE1-MOB4S4R3N1 261 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 MEIOCA2RUB1 952 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 ACPPP15309 386 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 PRPS1L1P21108 318 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 CRATP43155 626 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 LIMK1P53667 647 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 UGT2B15P54855 530 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 DOC2BQ14184 412 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 SLBPQ14493 270 aaKnown RBP eCLIP14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 DUOXA1Q1HG43 343 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 C1orf53Q5VUE5 145 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 OR2T5Q6IEZ7 315 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 TECPR1Q7Z6L1 1165 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 ADGRD2Q7Z7M1 963 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 OR2T29Q8NH02 315 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 ARRDC3Q96B67 414 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 TRNT1Q96Q11 434 aaKnown RBP14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 DUSP26Q9BV47 211 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 SAGE1Q9NXZ1 904 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 TAS2R16Q9NYV7 291 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 LYVE1Q9Y5Y7 322 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 KCNE2Q9Y6J6 123 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 A3GALT2U3KPV4 340 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 A0A0C4DFX4 3053 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 KIAA0355O15063 1070 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 RPLP0P05388 317 aaKnown RBP14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 HNF4AP41235 474 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 HTRA4P83105 476 aaPredicted RBP14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 VLDLRP98155 873 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 KRR1Q13601 381 aaKnown RBP14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 BAK1Q16611 211 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 PROX2Q3B8N5 592 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 CPTPQ5TA50 214 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 KIAA1614Q5VZ46 1190 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 ATG9BQ674R7 924 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 ZNF852Q6ZMS4 543 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 CSGALNACT1Q8TDX6 532 aa14.87□□□□□ -0.03
SHROOM1-201ENST00000319854 TPT1P8Q9HAU6 139 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms