RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 CRTC2Q53ET0 693 aaPredicted RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CD276Q5ZPR3 534 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 Q6ZPB1 254 aaPredicted RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ADGRD2Q7Z7M1 963 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 GJD3Q8N144 294 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 VANGL1Q8TAA9 524 aaPredicted RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 UBE2E3Q969T4 207 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 EGLN2Q96KS0 407 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 C1QTNF7Q9BXJ2 289 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 TMEM39AQ9NV64 488 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 TMLHEQ9NVH6 421 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ASB6Q9NWX5 421 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 GPRC5BQ9NZH0 403 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 OGDHLQ9ULD0 1010 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 MAB21L2Q9Y586 359 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 PCDHGC4Q9Y5F7 938 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CFAP20Q9Y6A4 193 aaKnown RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 GLYATL1P3A0A0U1RQE8 302 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 A0A1W2PRG6 482 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 PITPNM1O00562 1244 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CDK2AP1O14519 115 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 TAPBPO15533 448 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 SGTAO43765 313 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 FZD6O60353 706 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CATP04040 527 aaKnown RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ITGB6P18564 788 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 HK1P19367 917 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CDKN2CP42773 168 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CRYBB2P43320 205 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 RABGGTBP53611 331 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 UBE3AQ05086 875 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ELAVL2Q12926 359 aaKnown RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 EIF2B5Q13144 721 aaKnown RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CAMK1Q14012 370 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 SCARB2Q14108 478 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 MFSD13AQ14CX5 517 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 PTCHD3Q3KNS1 767 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF628Q5EBL2 1059 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF57Q68EA5 555 aaPredicted RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ANGPTL8Q6UXH0 198 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 GPALPP1Q8IXQ4 340 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 FBXL6Q8N531 539 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF680Q8NEM1 530 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 OR7D4Q8NG98 312 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 OR52J3Q8NH60 311 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 C17orf62Q9BQA9 187 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 EFCAB11Q9BUY7 163 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 KATNBL1Q9H079 304 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 UCKL1Q9NWZ5 548 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ST3GAL5Q9UNP4 418 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CASTOR2A6NHX0 329 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 TMEM189-UBE2V1I3L0A0 370 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CBX4O00257 560 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 BTN3A3O00478 584 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 SLC28A2O43868 658 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 STX11O75558 287 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 LRATO95237 230 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 SNAI1O95863 264 aaPredicted RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 STOMP27105 288 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 SPAM1P38567 509 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 MMP12P39900 470 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CCT3P49368 545 aaKnown RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 TMEM107Q6UX40 140 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 C3orf58Q8NDZ4 430 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 SGTBQ96EQ0 304 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 MYOCQ99972 504 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 RNF167Q9H6Y7 350 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ZFYVE1Q9HBF4 777 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ACER3Q9NUN7 267 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ABI2Q9NYB9 513 aaPredicted RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ATP6V1HQ9UI12 483 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 NCKAP1Q9Y2A7 1128 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 SLC45A1Q9Y2W3 748 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 PCDHB9Q9Y5E1 797 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ALG5Q9Y673 324 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ARL5CA6NH57 179 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 H0YIV9 168 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 SYN3O14994 580 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 SCAMP2O15127 329 aaKnown RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 PCDH7O60245 1069 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ATP5C1P36542 298 aaKnown RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 IFNGR2P38484 337 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 LIMS1P48059 325 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 EVX1P49640 407 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 EPHA4P54764 986 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ADAM15Q13444 863 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 SNAPC1Q16533 368 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 REEP3Q6NUK4 255 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 SLC38A6Q8IZM9 456 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ATP6V1C2Q8NEY4 427 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CDC26Q8NHZ8 85 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 SEPT5Q99719 369 aaPredicted RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 DPH2Q9BQC3 489 aaPredicted RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CBLCQ9ULV8 474 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 DSPPQ9NZW4 1301 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 A0A0U1RQF3 1178 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 F8W810 466 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 NFKBIEO00221 500 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms