RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 LIM2P55344 173 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 TGFBIQ15582 683 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 EMC4Q5J8M3 183 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 ABHD17CQ6PCB6 329 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 MEX3BQ6ZN04 569 aaKnown RBP16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 CEP128Q6ZU80 1094 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 FRA10AC1Q70Z53 315 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 ZNF595Q8IYB9 648 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 KRT78Q8N1N4 520 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 OR2L5Q8NG80 312 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 ESAMQ96AP7 390 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 C14orf79Q96F83 325 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 VPS39Q96JC1 886 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 TREX2Q9BQ50 279 aaPredicted RBP16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 DERL2Q9GZP9 239 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 REXO4Q9GZR2 422 aaKnown RBP16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 DEFB127Q9H1M4 99 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 KCNF1Q9H3M0 494 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 RHOJQ9H4E5 214 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 CAB39LQ9H9S4 337 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 ADAP2Q9NPF8 381 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 NF1P21359 2839 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 A0A0G2JMM0 328 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 A0A1W2PPB8 328 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 A0A1W2PRS3 328 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 ANKDD1BA6NHY2 528 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 KIR3DP1A8MWS1 328 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 GGT5P36269 586 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 TLE4Q04727 773 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 IL20RBQ6UXL0 311 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 EID3Q8N140 333 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 RPRMLQ8N4K4 120 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 ZNF321PQ8N8H1 164 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 PSD4Q8NDX1 1056 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 PTPMT1Q8WUK0 201 aaPredicted RBP16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 F2RL3Q96RI0 385 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 SERINC2Q96SA4 455 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 CCDC77Q9BR77 488 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 PITHD1Q9GZP4 211 aaPredicted RBP16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 POPDC3Q9HBV1 291 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 TIMMDC1Q9NPL8 285 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 PRDM7Q9NQW5 492 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 GPRC5BQ9NZH0 403 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 COQ3Q9NZJ6 369 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 MYOTQ9UBF9 498 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 DAPP1Q9UN19 280 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 ERVK-11Q9UQG0 969 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 ITPR3Q14573 2671 aa16.22■□□□□ 0.19
EXOSC4-201ENST00000316052 USP27XA6NNY8 438 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 A8MVJ9 347 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 CXorf49A8MYA2 514 aaPredicted RBP16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 CTNSO60931 367 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 OR6B1O95007 311 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 TUBB4AP04350 444 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 CD22P20273 847 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 GSTM2P28161 218 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 RPL21P46778 160 aaKnown RBP16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 HSPA7P48741 367 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 CBLBQ13191 982 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 BMPR2Q13873 1038 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 DOC2AQ14183 400 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 OR4D1Q15615 310 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 ELAVL1Q15717 326 aaKnown RBP16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 ARHGAP11AQ6P4F7 1023 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 CAPN12Q6ZSI9 719 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 UBE3DQ7Z6J8 389 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 TMEM132CQ8N3T6 1108 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 SEC16BQ96JE7 1060 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 CAPS2Q9BXY5 557 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 ALOXE3Q9BYJ1 711 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 UCK2Q9BZX2 261 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 EHD1Q9H4M9 534 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 MCCC2Q9HCC0 563 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 DNAJC11Q9NVH1 559 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 HPF1Q9NWY4 346 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 VTI1BQ9UEU0 232 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 RNF6Q9Y252 685 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 SNX24Q9Y343 169 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 CLCA3PQ9Y6N3 262 aa16.21■□□□□ 0.19
EXOSC4-201ENST00000316052 NINQ8N4C6 2090 aa16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 A0A088AWK7 358 aa16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 WWP2O00308 870 aa16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 PHGDHO43175 533 aaKnown RBP16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 ZNF354AO60765 605 aaPredicted RBP16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 IFNA16P05015 189 aa16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 CCDC166P0CW27 439 aa16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 EPORP19235 508 aa16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 CAPN3P20807 821 aa16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 ZNF10P21506 573 aaPredicted RBP16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 SOX3P41225 446 aa16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 KCNC1P48547 511 aa16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 MTTPP55157 894 aa16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 PPIAP62937 165 aaKnown RBP16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 MRPS25P82663 173 aaKnown RBP16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 POU4F1Q01851 419 aa16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 TESK1Q15569 626 aa16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 ZNF750Q32MQ0 723 aa16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 TRIM40Q6P9F5 258 aa16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 GPSM1Q86YR5 675 aa16.2■□□□□ 0.18
EXOSC4-201ENST00000316052 ZBED8Q8IZ13 594 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms