RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 STK32CQ86UX6 486 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 ACOT4Q8N9L9 421 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 TMEM52Q8NDY8 209 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 OR2I1PQ8NGU4 316 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 CCDC115Q96NT0 180 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 PRR14Q9BWN1 585 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 CHST8Q9H2A9 424 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 EQTNQ9NQ60 294 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 PRDM7Q9NQW5 492 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 DCAF13Q9NV06 445 aaKnown RBP6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 MRGBPQ9NV56 204 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 PCDHGA4Q9Y5G9 962 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 IL10P22301 178 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 HPCAL1P37235 193 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 SIM1P81133 766 aaPredicted RBP6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 LSM11P83369 360 aaKnown RBP eCLIP6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 DBPQ10586 325 aaPredicted RBP6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 MED21Q13503 144 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 TP53BP2Q13625 1128 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 BLMHQ13867 455 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 ARHGAP19Q14CB8 494 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 VMACQ2NL98 169 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 NHSL2Q5HYW2 709 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 OR4C11Q6IEV9 310 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 FAM92BQ6ZTR7 304 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 HORMAD2Q8N7B1 307 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 AVL9Q8NBF6 648 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 KAT2AQ92830 837 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 COL26A1Q96A83 441 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 REPS1Q96D71 796 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 CNRIP1Q96F85 164 aaPredicted RBP6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 C16orf58Q96GQ5 468 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 DNMT3AQ9Y6K1 912 aaPredicted RBP6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 EP300Q09472 2414 aaPredicted RBP6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 SERTM1A2A2V5 107 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 MYO1GB0I1T2 1018 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 PRAMEF26H0Y7S4 382 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 STAMBPO95630 424 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 AIFM1O95831 613 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 CST1P01037 141 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 VIPP01282 170 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 CTSEP14091 401 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 ST6GAL1P15907 406 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 PI4KAP42356 2102 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 GFERP55789 205 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 IL1RL1Q01638 556 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 ZP2Q05996 745 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 PDE7AQ13946 482 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 KCNAB1Q14722 419 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 SMU1Q2TAY7 513 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 KLHL17Q6TDP4 642 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 Q6ZPB1 254 aaPredicted RBP6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 RBM45Q8IUH3 476 aaKnown RBP6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 FAM47BQ8NA70 645 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 LMX1AQ8TE12 382 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 ZG16BQ96DA0 208 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 HSH2DQ96JZ2 352 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 PRPF18Q99633 342 aaKnown RBP6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 SIRT3Q9NTG7 399 aaPredicted RBP6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 MAGEL2Q9UJ55 1249 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 SCML1Q9UN30 329 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 TECTAO75443 2155 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 CLOCKO15516 846 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 LDB3O75112 727 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 FKBP9O95302 570 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 BMP2P12643 396 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 HSD3B1P14060 373 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 GPX2P18283 190 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 HSD3B2P26439 372 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 CHI3L1P36222 383 aaPredicted RBP6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 MANFP55145 182 aaKnown RBP6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 BNIP3Q12983 259 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 ZNF425Q6IV72 752 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 ABHD17CQ6PCB6 329 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 FKBP9P1Q75LS8 142 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 MEX3DQ86XN8 651 aaKnown RBP6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 REXO5Q96IC2 774 aaKnown RBP6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 MYNNQ9NPC7 610 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 CTPS2Q9NRF8 586 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 FAM120CQ9NX05 1096 aaKnown RBP6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 SIRT5Q9NXA8 310 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 ACTR10Q9NZ32 417 aa6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 FAF1Q9UNN5 650 aaPredicted RBP6.64□□□□□ -1.35
LYSMD3-201ENST00000315948 A0A0A6YYD5 115 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 C10orf142B7Z368 130 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 GPR89AB7ZAQ6 455 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 CAPN5O15484 640 aaPredicted RBP6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 APBB3O95704 486 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 CAPNS1P04632 268 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 FAM58BPP0C7Q3 252 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 GPR89BP0CG08 455 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 DDCP20711 480 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 TEAD1P28347 426 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 HHEXQ03014 270 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 ERV3-1Q14264 604 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 DUSP7Q16829 419 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 SYT16Q17RD7 645 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 OR52E8Q6IFG1 317 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 TMEM107Q6UX40 140 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 UBE2FQ969M7 185 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms