RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 PRKRAO75569 313 aaKnown RBP7.42□□□□□ -1.22
CDC42-201ENST00000315554 ZWINTO95229 277 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 BMP10O95393 424 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 ONECUT2O95948 504 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 ALBP02768 609 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 ENO1P06733 434 aaKnown RBP7.42□□□□□ -1.22
CDC42-201ENST00000315554 HEXBP07686 556 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 DHRS4L1P0CG22 281 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 ATP5A1P25705 553 aaKnown RBP7.42□□□□□ -1.22
CDC42-201ENST00000315554 PTX3P26022 381 aaPredicted RBP7.42□□□□□ -1.22
CDC42-201ENST00000315554 GSTM2P28161 218 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 SERPINB1P30740 379 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 PIK3CBP42338 1070 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 HNRNPFP52597 415 aaKnown RBP7.42□□□□□ -1.22
CDC42-201ENST00000315554 EMP2P54851 167 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 EEF1A2Q05639 463 aaKnown RBP7.42□□□□□ -1.22
CDC42-201ENST00000315554 BTKQ06187 659 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 ASPHQ12797 758 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 ATP1A4Q13733 1029 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 RCN2Q14257 317 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 ABRAXAS2Q15018 415 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 UGT8Q16880 541 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 AP5B1Q2VPB7 878 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 ARL13AQ5H913 290 aaPredicted RBP7.42□□□□□ -1.22
CDC42-201ENST00000315554 CPZQ66K79 652 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 RIPOR1Q6ZS17 1223 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 LANCL3Q6ZV70 420 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 CHSY3Q70JA7 882 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 PPP1R32Q7Z5V6 425 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 KRT77Q7Z794 578 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 GOLGA6L1Q8N7Z2 621 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 FAM47BQ8NA70 645 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 TMEM52Q8NDY8 209 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 EXTL1Q92935 676 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 TSLPQ969D9 159 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 CNDP1Q96KN2 507 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 CSF3RQ99062 836 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 SH3GL2Q99962 352 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 MAPKAP1Q9BPZ7 522 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 SLC29A3Q9BZD2 475 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 SLC26A1Q9H2B4 701 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 PRORYQ9H606 182 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 VIPAS39Q9H9C1 493 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 ADGRE2Q9UHX3 823 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 C3orf18Q9UK00 162 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 FBXW2Q9UKT8 454 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 MKL2Q9ULH7 1088 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 SNX6Q9UNH7 406 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 STK38LQ9Y2H1 464 aa7.42□□□□□ -1.22
CDC42-201ENST00000315554 SEC16AO15027 2179 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 DSPP15924 2871 aaKnown RBP7.41□□□□□ -1.22
CDC42-201ENST00000315554 IGLV3-12A0A075B6K2 115 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 IGHV3-20A0A0C4DH32 117 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 TMEM238LA0A1B0GVL6 79 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 IDSB3KWA1 339 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 FOXE1O00358 373 aaPredicted RBP7.41□□□□□ -1.22
CDC42-201ENST00000315554 AZIN1O14977 448 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 TMPRSS11DO60235 418 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 NPHS1O60500 1241 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 ULK1O75385 1050 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 HSPA4LO95757 839 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 KRT6AP02538 564 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 KRT6BP04259 564 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 FHP07954 510 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 RNH1P13489 461 aaKnown RBP7.41□□□□□ -1.22
CDC42-201ENST00000315554 HIST1H1TP22492 207 aaPredicted RBP7.41□□□□□ -1.22
CDC42-201ENST00000315554 BSGP35613 385 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 KRT6CP48668 564 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 MTTPP55157 894 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 LIM2P55344 173 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 BTG2P78543 158 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 MC1RQ01726 317 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 TGM3Q08188 693 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 SLAMF1Q13291 335 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 TMEM35AQ53FP2 167 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 SH2D4BQ5SQS7 431 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 C1QTNF12Q5T7M4 302 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 OR4C11Q6IEV9 310 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 GPR155Q7Z3F1 870 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 CLNKQ7Z7G1 428 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 MRGPREQ86SM8 312 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 ACOT4Q8N9L9 421 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 ADAMTS17Q8TE56 1095 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 UCN3Q969E3 161 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 RGMAQ96B86 450 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 SEC16BQ96JE7 1060 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 KCNC2Q96PR1 638 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 SERINC2Q96SA4 455 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 SERPINI1Q99574 410 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 TBCDQ9BTW9 1192 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 ZNF717Q9BY31 904 aaPredicted RBP7.41□□□□□ -1.22
CDC42-201ENST00000315554 ACPTQ9BZG2 426 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 VN1R1Q9GZP7 353 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 WDR54Q9H977 334 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 LANCL2Q9NS86 450 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 C14orf105Q9NVL8 296 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 NKIRAS1Q9NYS0 192 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 EGFL7Q9UHF1 273 aa7.41□□□□□ -1.22
CDC42-201ENST00000315554 NXT1Q9UKK6 140 aaKnown RBP7.41□□□□□ -1.22
CDC42-201ENST00000315554 RALYQ9UKM9 306 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms