RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 AKT1S1Q96B36 256 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 HS6ST2Q96MM7 605 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 ZNF701Q9NV72 531 aaPredicted RBP14.95□□□□□ -0.02
HCFC1-201ENST00000310441 TIMM8BQ9Y5J9 83 aaPredicted RBP14.95□□□□□ -0.02
HCFC1-201ENST00000310441 HSPE1-MOB4S4R3N1 261 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 GPRC6AQ5T6X5 926 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 KIAA0319Q5VV43 1072 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 ZNF767PQ75MW2 155 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 ITFG2Q969R8 447 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 TRIB3Q96RU7 358 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 YIPF4Q9BSR8 244 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 RPF2Q9H7B2 306 aaKnown RBP14.95□□□□□ -0.02
HCFC1-201ENST00000310441 SDHAF2Q9NX18 166 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 PCDHB3Q9Y5E6 796 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 PRSS51A0A1B0GVH4 220 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 CIB4A0PJX0 185 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 ELOAQ14241 798 aaKnown RBP14.94□□□□□ -0.02
HCFC1-201ENST00000310441 CMTM1Q8IZ96 169 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 TSTD1Q8NFU3 115 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 TERB2Q8NHR7 220 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 CPT1CQ8TCG5 803 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 POPDC3Q9HBV1 291 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 ABCB8Q9NUT2 735 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 FCER2P06734 321 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 THEGLP0DJG4 465 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 ENTPD1P49961 510 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 FAM110CQ1W6H9 321 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 ACSBG2Q5FVE4 666 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 WDR53Q7Z5U6 358 aaPredicted RBP14.94□□□□□ -0.02
HCFC1-201ENST00000310441 SUV39H2Q9H5I1 410 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 H2AFB2P0C5Z0 115 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 UQCRC1P31930 480 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 KCNC1P48547 511 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 ZNF616Q08AN1 781 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 ECH1Q13011 328 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 PTCHD3Q3KNS1 767 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 FBXL3Q9UKT7 428 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 FAM230AA0A1W2PPH8 454 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 MAGEA11P43364 429 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 FOXK1P85037 733 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 CDK3Q00526 305 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 GALK2Q01415 458 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 GSTM4Q03013 218 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 HNRNPA0Q13151 305 aaKnown RBP14.94□□□□□ -0.02
HCFC1-201ENST00000310441 CCINQ13939 588 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 PDGFRLQ15198 375 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 FLYWCH1Q4VC44 716 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 OR8S1Q8NH09 359 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 SPIN2AQ99865 258 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 SPIN2BQ9BPZ2 258 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 SOCS5O75159 536 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 GBX1Q14549 363 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 ITPRIPL2Q3MIP1 535 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 LINGO4Q6UY18 593 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 PHOSPHO1Q8TCT1 267 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 SLC35F5Q8WV83 523 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 RRNAD1Q96FB5 475 aaKnown RBP14.94□□□□□ -0.02
HCFC1-201ENST00000310441 SLC6A7Q99884 636 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 HIF3AQ9Y2N7 669 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 EBLN1P0CF75 366 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 CDNFQ49AH0 187 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 ZNF611Q8N823 705 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 GOLM1Q8NBJ4 401 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 POGLUT1Q8NBL1 392 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 SNAPC3Q92966 411 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 ABRACLQ9P1F3 81 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 RNF215Q9Y6U7 377 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 ANKRD36CQ5JPF3 1778 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 ENPP3O14638 875 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 POLR1CO15160 346 aaPredicted RBP14.94□□□□□ -0.02
HCFC1-201ENST00000310441 DUSP11O75319 330 aaKnown RBP14.94□□□□□ -0.02
HCFC1-201ENST00000310441 AMZ1Q400G9 498 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 ADGRF1Q5T601 910 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 EPGNQ6UW88 154 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 PEX13Q92968 403 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 BMFQ96LC9 184 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 HYLS1Q96M11 299 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 CNN2Q99439 309 aaKnown RBP14.94□□□□□ -0.02
HCFC1-201ENST00000310441 BARD1Q99728 777 aaKnown RBP14.94□□□□□ -0.02
HCFC1-201ENST00000310441 CCDC106Q9BWC9 280 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 MAGIXQ9H6Y5 334 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 RXFP3Q9NSD7 469 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 MGAT4CQ9UBM8 478 aa14.94□□□□□ -0.02
HCFC1-201ENST00000310441 STMND1H3BQB6 276 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 M0R2N6 131 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 RASAL1O95294 804 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 PHF19Q5T6S3 580 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 ZNF675Q8TD23 568 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 PYCR2Q96C36 320 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 AOC2O75106 756 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 ACTL6BO94805 426 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 MLLT1Q03111 559 aaPredicted RBP14.93□□□□□ -0.02
HCFC1-201ENST00000310441 EOGTQ5NDL2 527 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 TMIGD1Q6UXZ0 262 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 C17orf62Q9BQA9 187 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 STUB1Q9UNE7 303 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 RGPD8O14715 1765 aaPredicted RBP14.93□□□□□ -0.02
HCFC1-201ENST00000310441 RCCD1A6NED2 376 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 INMT-MINDY4F8WBC2 141 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 ATE1O95260 518 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms