RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 SPATA9Q9BWV2 254 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 SLC25A51Q9H1U9 297 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 TFB2MQ9H5Q4 396 aaKnown RBP7.9□□□□□ -1.15
VPS41-202ENST00000310301 TMEM184CQ9NVA4 438 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 ZIM2Q9NZV7 527 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 AGAP5A6NIR3 686 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 SAP18O00422 153 aaKnown RBP7.89□□□□□ -1.15
VPS41-202ENST00000310301 MATN3O15232 486 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 CREG1O75629 220 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 BPNT1O95861 308 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 GSTM3P21266 225 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 SLC8B1Q6J4K2 584 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 FAM129CQ86XR2 697 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 DNAJC5GQ8N7S2 189 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 DENND1AQ8TEH3 1009 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 FAM83CQ9BQN1 747 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 ERVK-18Q9QC07 812 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 CD84Q9UIB8 345 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 PCDHB3Q9Y5E6 796 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 CACNA1SQ13698 1873 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 TEX13DA0A0J9YY54 714 aaPredicted RBP7.89□□□□□ -1.15
VPS41-202ENST00000310301 A0A1W2PRB8 838 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 H3BSH0 61 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 SOX14O95416 240 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 CYB5AP00167 134 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 H2AFB2P0C5Z0 115 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 NDUFS1P28331 727 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 ARSFP54793 590 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 CHAF1BQ13112 559 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 COL28A1Q2UY09 1125 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 ZNF367Q7RTV3 350 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 MMAAQ8IVH4 418 aaKnown RBP7.89□□□□□ -1.15
VPS41-202ENST00000310301 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.89□□□□□ -1.15
VPS41-202ENST00000310301 ZNF101Q8IZC7 436 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 NXPE1Q8N323 547 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 SAMD12Q8N8I0 201 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 ADAMTS19Q8TE59 1207 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 SGCDQ92629 289 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 ZNF514Q96K75 400 aaPredicted RBP7.89□□□□□ -1.15
VPS41-202ENST00000310301 CAMK1GQ96NX5 476 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 SOX17Q9H6I2 414 aaPredicted RBP7.89□□□□□ -1.15
VPS41-202ENST00000310301 ZNF225Q9UK10 706 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 RREB1Q92766 1687 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 TRBC2A0A5B9 178 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 OR2AG2A6NM03 316 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 A8MT66 165 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 C1orf196B1AJZ1 125 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 H0YAE9 185 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 JMJD7P0C870 316 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 EVI2BP34910 448 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 DSTNP60981 165 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 NPY5RQ15761 445 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 SPIN3Q5JUX0 258 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 MARCH8Q5T0T0 291 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 MFSD6LQ8IWD5 586 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 SLC44A3Q8N4M1 653 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 ANKFN1Q8N957 763 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 DTX3Q8N9I9 347 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 C3orf58Q8NDZ4 430 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 OR9I1Q8NGQ6 314 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 OR5AK3PQ8NH89 298 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 ZUFSPQ96AP4 578 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 ZNF486Q96H40 463 aaPredicted RBP7.89□□□□□ -1.15
VPS41-202ENST00000310301 HSH2DQ96JZ2 352 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 MTERF1Q99551 399 aaKnown RBP7.89□□□□□ -1.15
VPS41-202ENST00000310301 ZNF696Q9H7X3 374 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 SCP2D1Q9UJQ7 156 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 GNG8Q9UK08 70 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 NOCTQ9UK39 431 aaKnown RBP7.89□□□□□ -1.15
VPS41-202ENST00000310301 SIX3O95343 332 aaPredicted RBP7.89□□□□□ -1.15
VPS41-202ENST00000310301 HSD3B2P26439 372 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 PBX2P40425 430 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 PNLIPRP1P54315 467 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 ERVFC1P60507 584 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 HMGCS1Q01581 520 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 SLC13A2Q13183 592 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 ELOCQ15369 112 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 RABL3Q5HYI8 236 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 OR4F3Q6IEY1 312 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 GRHL2Q6ISB3 625 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 ZNF783Q6ZMS7 281 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 JAGN1Q8N5M9 183 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 FAM46DQ8NEK8 389 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 PROKR2Q8NFJ6 384 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 RPLP0P6Q8NHW5 317 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 TCTEX1D2Q8WW35 142 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 RELTQ969Z4 430 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 ZNF599Q96NL3 588 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 PRRG4Q9BZD6 226 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 HSD3B7Q9H2F3 369 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 DMAC2Q9NW81 257 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 EVLQ9UI08 416 aaPredicted RBP7.89□□□□□ -1.15
VPS41-202ENST00000310301 MYH13Q9UKX3 1938 aa7.89□□□□□ -1.15
VPS41-202ENST00000310301 PCDH7O60245 1069 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 ECI2O75521 394 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 SRFP11831 508 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 PRPS1L1P21108 318 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 MAT2AP31153 395 aaKnown RBP7.88□□□□□ -1.15
VPS41-202ENST00000310301 VIPR2P41587 438 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 MAGEA6P43360 314 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 369.5 ms