RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 TRIM73Q86UV7 250 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 RNF130Q86XS8 419 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 SRFBP1Q8NEF9 429 aaKnown RBP20.21■□□□□ 0.83
ATG4D-201ENST00000309469 FAM174AQ8TBP5 190 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 UCN3Q969E3 161 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 EXOSC8Q96B26 276 aaKnown RBP20.21■□□□□ 0.83
ATG4D-201ENST00000309469 ADI1Q9BV57 179 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 NLNQ9BYT8 704 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 EPS8L2Q9H6S3 715 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 C1GALT1Q9NS00 363 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 SMPD3Q9NY59 655 aaPredicted RBP20.21■□□□□ 0.83
ATG4D-201ENST00000309469 TAS2R7Q9NYW3 318 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 ACTR10Q9NZ32 417 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 MAP4K5Q9Y4K4 846 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 KIR2DS5A0A0G2JLQ3 304 aa20.2■□□□□ 0.82
ATG4D-201ENST00000309469 A0A0G2JNG1 304 aa20.2■□□□□ 0.82
ATG4D-201ENST00000309469 G3V2T6 193 aa20.2■□□□□ 0.82
ATG4D-201ENST00000309469 KIR2DS3K7RE56 304 aa20.2■□□□□ 0.82
ATG4D-201ENST00000309469 TNFSF14O43557 240 aa20.2■□□□□ 0.82
ATG4D-201ENST00000309469 ATP5A1P25705 553 aaKnown RBP20.2■□□□□ 0.82
ATG4D-201ENST00000309469 UBE2IP63279 158 aaKnown RBP20.2■□□□□ 0.82
ATG4D-201ENST00000309469 RBBP4Q09028 425 aa20.2■□□□□ 0.82
ATG4D-201ENST00000309469 KIR2DS5Q14953 304 aa20.2■□□□□ 0.82
ATG4D-201ENST00000309469 NDUFAF5Q5TEU4 345 aa20.2■□□□□ 0.82
ATG4D-201ENST00000309469 ZDHHC13Q8IUH4 622 aa20.2■□□□□ 0.82
ATG4D-201ENST00000309469 ZDHHC21Q8IVQ6 265 aa20.2■□□□□ 0.82
ATG4D-201ENST00000309469 ACOT4Q8N9L9 421 aa20.2■□□□□ 0.82
ATG4D-201ENST00000309469 OR8K5Q8NH50 307 aa20.2■□□□□ 0.82
ATG4D-201ENST00000309469 OR10G6Q8NH81 332 aa20.2■□□□□ 0.82
ATG4D-201ENST00000309469 FAIM2Q9BWQ8 316 aa20.2■□□□□ 0.82
ATG4D-201ENST00000309469 WNT16Q9UBV4 365 aa20.2■□□□□ 0.82
ATG4D-201ENST00000309469 APOBEC3BQ9UH17 382 aaKnown RBP20.2■□□□□ 0.82
ATG4D-201ENST00000309469 SNX8Q9Y5X2 465 aa20.2■□□□□ 0.82
ATG4D-201ENST00000309469 PLXND1Q9Y4D7 1925 aa20.2■□□□□ 0.82
ATG4D-201ENST00000309469 GSAPA4D1B5 854 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 OR2A25A4D2G3 310 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 PRIM2P49643 509 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 ARSFP54793 590 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 STXBP1P61764 594 aaKnown RBP20.19■□□□□ 0.82
ATG4D-201ENST00000309469 MRM1Q6IN84 353 aaKnown RBP20.19■□□□□ 0.82
ATG4D-201ENST00000309469 FBXO42Q6P3S6 717 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 STK32CQ86UX6 486 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 SHDQ96IW2 340 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 TMEM121BQ9BXQ6 578 aaPredicted RBP20.19■□□□□ 0.82
ATG4D-201ENST00000309469 TMEM38AQ9H6F2 299 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 IL1RAPQ9NPH3 570 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 FBXL21Q9UKT6 434 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 ASB4Q9Y574 426 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 NUP214P35658 2090 aaPredicted RBP20.19■□□□□ 0.82
ATG4D-201ENST00000309469 LRP4O75096 1905 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 PLOD2O00469 737 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 GCM2O75603 506 aaPredicted RBP20.19■□□□□ 0.82
ATG4D-201ENST00000309469 SEMG1P04279 462 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 MAGP20916 626 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 TSFMP43897 325 aaKnown RBP20.19■□□□□ 0.82
ATG4D-201ENST00000309469 BLKP51451 505 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 ALDH3A2P51648 485 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 IST1P53990 364 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 DAG1Q14118 895 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 SLC36A3Q495N2 470 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 VN1R4Q7Z5H5 301 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 PARGQ86W56 976 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 SFTPA2Q8IWL1 248 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 SVOPLQ8N434 492 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 SLC37A2Q8TED4 501 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 SDCCAG3Q96C92 435 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 ZBED6CLQ96FA7 236 aaPredicted RBP20.19■□□□□ 0.82
ATG4D-201ENST00000309469 HSH2DQ96JZ2 352 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 FCRL4Q96PJ5 515 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 ASPSCR1Q9BZE9 553 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 ZNF696Q9H7X3 374 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 EHD3Q9NZN3 535 aa20.19■□□□□ 0.82
ATG4D-201ENST00000309469 MAGED1Q9Y5V3 778 aaPredicted RBP20.19■□□□□ 0.82
ATG4D-201ENST00000309469 HEATR5BQ9P2D3 2071 aa20.18■□□□□ 0.82
ATG4D-201ENST00000309469 NDUFS2O75306 463 aa20.18■□□□□ 0.82
ATG4D-201ENST00000309469 GUCY1B2O75343 617 aa20.18■□□□□ 0.82
ATG4D-201ENST00000309469 PXNP49023 591 aaPredicted RBP20.18■□□□□ 0.82
ATG4D-201ENST00000309469 CRYBA2P53672 197 aa20.18■□□□□ 0.82
ATG4D-201ENST00000309469 RAB8AP61006 207 aa20.18■□□□□ 0.82
ATG4D-201ENST00000309469 C1orf61Q13536 156 aa20.18■□□□□ 0.82
ATG4D-201ENST00000309469 MYBPC3Q14896 1274 aa20.18■□□□□ 0.82
ATG4D-201ENST00000309469 VTCN1Q7Z7D3 282 aa20.18■□□□□ 0.82
ATG4D-201ENST00000309469 ASPGQ86U10 573 aa20.18■□□□□ 0.82
ATG4D-201ENST00000309469 DEFB119Q8N690 84 aa20.18■□□□□ 0.82
ATG4D-201ENST00000309469 NELL2Q99435 816 aa20.18■□□□□ 0.82
ATG4D-201ENST00000309469 FAM192AQ9GZU8 254 aa20.18■□□□□ 0.82
ATG4D-201ENST00000309469 NEUROD4Q9HD90 331 aa20.18■□□□□ 0.82
ATG4D-201ENST00000309469 ACSS1Q9NUB1 689 aaPredicted RBP20.18■□□□□ 0.82
ATG4D-201ENST00000309469 FAM221BA6H8Z2 402 aa20.17■□□□□ 0.82
ATG4D-201ENST00000309469 METTL12A8MUP2 240 aa20.17■□□□□ 0.82
ATG4D-201ENST00000309469 FKBP9O95302 570 aa20.17■□□□□ 0.82
ATG4D-201ENST00000309469 SMIM18P0DKX4 95 aa20.17■□□□□ 0.82
ATG4D-201ENST00000309469 FOSL2P15408 326 aa20.17■□□□□ 0.82
ATG4D-201ENST00000309469 CD27P26842 260 aa20.17■□□□□ 0.82
ATG4D-201ENST00000309469 AQP1P29972 269 aa20.17■□□□□ 0.82
ATG4D-201ENST00000309469 TGM3Q08188 693 aa20.17■□□□□ 0.82
ATG4D-201ENST00000309469 SCARB2Q14108 478 aa20.17■□□□□ 0.82
ATG4D-201ENST00000309469 MLC1Q15049 377 aa20.17■□□□□ 0.82
ATG4D-201ENST00000309469 FCRL6Q6DN72 434 aa20.17■□□□□ 0.82
ATG4D-201ENST00000309469 ISLR2Q6UXK2 745 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms