RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 AIG1Q9NVV5 245 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 TMEM248Q9NWD8 314 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 UCKL1Q9NWZ5 548 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 CMTM6Q9NX76 183 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 SMPD3Q9NY59 655 aaPredicted RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 SLC2A6Q9UGQ3 507 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 SUN2Q9UH99 717 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 GNPTGQ9UJJ9 305 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 LEF1Q9UJU2 399 aaPredicted RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 ANAPC2Q9UJX6 822 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 ERVW-1Q9UQF0 538 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 SH3GLB1Q9Y371 365 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 FADS3Q9Y5Q0 445 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 DNAJC15Q9Y5T4 150 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 GPR45Q9Y5Y3 372 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 COMMD10Q9Y6G5 202 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 HIVEP3Q5T1R4 2406 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 IGLV3-10A0A075B6K4 115 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 A0A1B0GVM2 712 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 FAM234BA2RU67 622 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 NEMP2A6NFY4 417 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 DRGXA6NNA5 263 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 J3QKU1 62 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 PLOD2O00469 737 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 NR5A2O00482 541 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 UBFD1O14562 309 aaKnown RBP4.7□□□□□ -1.66
CKS1B-201ENST00000308987 PIP5K1BO14986 540 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 PFDN6O15212 129 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 LDB2O43679 373 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 DFNA5O60443 496 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 KERAO60938 352 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 PMPCBO75439 489 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 LATS1O95835 1130 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 MT-CO3P00414 261 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 PYGLP06737 847 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 RPS17P08708 135 aaKnown RBP4.7□□□□□ -1.66
CKS1B-201ENST00000308987 UROSP10746 265 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 CDH1P12830 882 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF37AP17032 561 aaPredicted RBP4.7□□□□□ -1.66
CKS1B-201ENST00000308987 CKMT2P17540 419 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 IL1RNP18510 177 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 CAPN3P20807 821 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 FBLP22087 321 aaKnown RBP4.7□□□□□ -1.66
CKS1B-201ENST00000308987 ACP1P24666 158 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 MAT2AP31153 395 aaKnown RBP4.7□□□□□ -1.66
CKS1B-201ENST00000308987 HNF1BP35680 557 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 GSK3BP49841 420 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 CDKN2DP55273 166 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 KCNK10P57789 538 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 GABARAPL2P60520 117 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 ERVK-8P63133 956 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 PRAMEP78395 509 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 PHEXP78562 749 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 EMX2Q04743 252 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 MAP4K2Q12851 820 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 CNTN1Q12860 1018 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF460Q14592 562 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 TESK1Q15569 626 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 PPP1R3AQ16821 1122 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 TYSND1Q2T9J0 566 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 POM121L1PQ3SYA9 428 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 PARP15Q460N3 678 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 CYBRD1Q53TN4 286 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 XKR7Q5GH72 579 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 MS4A13Q5J8X5 152 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 PITRM1Q5JRX3 1037 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 MPP7Q5T2T1 576 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 ARHGAP40Q5TG30 622 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 TTC23Q5W5X9 447 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 METTL2BQ6P1Q9 378 aaKnown RBP4.7□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF773Q6PK81 442 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.7□□□□□ -1.66
CKS1B-201ENST00000308987 ARHGAP36Q6ZRI8 547 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 FRA10AC1Q70Z53 315 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 EPHX4Q8IUS5 362 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 DDIASQ8IXT1 998 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF683Q8IZ20 524 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF786Q8N393 782 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 CARNMT1Q8N4J0 409 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 TTC30BQ8N4P2 665 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 PTGR2Q8N8N7 351 aaPredicted RBP4.7□□□□□ -1.66
CKS1B-201ENST00000308987 ATP6V0D2Q8N8Y2 350 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 MINDY2Q8NBR6 621 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 OR13F1Q8NGS4 319 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 OR14C36Q8NHC7 312 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 BRSK1Q8TDC3 778 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 GANCQ8TET4 914 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 RAB2BQ8WUD1 216 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 ANKRD49Q8WVL7 239 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 TRUB1Q8WWH5 349 aaKnown RBP4.7□□□□□ -1.66
CKS1B-201ENST00000308987 HDAC2Q92769 488 aaKnown RBP4.7□□□□□ -1.66
CKS1B-201ENST00000308987 KLK6Q92876 244 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 HDAC10Q969S8 669 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 TMIGD2Q96BF3 282 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 PHF21BQ96EK2 531 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 MOCOSQ96EN8 888 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 ALG14Q96F25 216 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 AURKBQ96GD4 344 aaPredicted RBP4.7□□□□□ -1.66
CKS1B-201ENST00000308987 CCDC115Q96NT0 180 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 KCTD14Q9BQ13 255 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms