RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 SH3BP4Q9P0V3 963 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 USP22Q9UPT9 525 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 MRPS2Q9Y399 296 aaKnown RBP6.61□□□□□ -1.35
PTCD2-201ENST00000308077 L3MBTL1Q9Y468 752 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 PCDHB14Q9Y5E9 798 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 NUP214P35658 2090 aaPredicted RBP6.61□□□□□ -1.35
PTCD2-201ENST00000308077 ACOT8O14734 319 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 B4GAT1O43505 415 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 KRT36O76013 467 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 SCELO95171 688 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 GSNP06396 782 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 SLC35G6P0C7Q6 338 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 SMIM10L1P0DMW3 83 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 GLB1P16278 677 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 DDCP20711 480 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 HIST1H1TP22492 207 aaPredicted RBP6.61□□□□□ -1.35
PTCD2-201ENST00000308077 ARFIP1P53367 373 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 ATXN3P54252 364 aaPredicted RBP6.61□□□□□ -1.35
PTCD2-201ENST00000308077 STXBP1P61764 594 aaKnown RBP6.61□□□□□ -1.35
PTCD2-201ENST00000308077 KCNC4Q03721 635 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 RGS1Q08116 209 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 CCDC6Q16204 474 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 RUNDC3AQ59EK9 446 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 TRIM61Q5EBN2 209 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 SAMD4BQ5PRF9 694 aaKnown RBP6.61□□□□□ -1.35
PTCD2-201ENST00000308077 FAM180BQ6P0A1 224 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 TRIM40Q6P9F5 258 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 SLC23A3Q6PIS1 610 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 TICAM1Q8IUC6 712 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 C10orf111Q8N326 155 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 ACOT4Q8N9L9 421 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 OR4C6Q8NH72 309 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 ZCCHC10Q8TBK6 192 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 NCSTNQ92542 709 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 GAL3ST3Q96A11 431 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 CIDECQ96AQ7 238 aaPredicted RBP6.61□□□□□ -1.35
PTCD2-201ENST00000308077 AURKBQ96GD4 344 aaPredicted RBP6.61□□□□□ -1.35
PTCD2-201ENST00000308077 SMIM10Q96HG1 83 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 ITCHQ96J02 903 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 CCDC115Q96NT0 180 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 ANKRD27Q96NW4 1050 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 TGM7Q96PF1 710 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 KCNC2Q96PR1 638 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 TBCDQ9BTW9 1192 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 BHLHE41Q9C0J9 482 aaPredicted RBP6.61□□□□□ -1.35
PTCD2-201ENST00000308077 RAB33BQ9H082 229 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 RMND5AQ9H871 391 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 C1GALT1Q9NS00 363 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 C5AR2Q9P296 337 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 SUCOQ9UBS9 1254 aaKnown RBP6.61□□□□□ -1.35
PTCD2-201ENST00000308077 EPHA6Q9UF33 1036 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 PADI4Q9UM07 663 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 MAPRE3Q9UPY8 281 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 ASB4Q9Y574 426 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 IGSF10Q6WRI0 2623 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 CABIN1Q9Y6J0 2220 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 IGHV5-51A0A0C4DH38 117 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 TLCD2A6NGC4 264 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 RNASET2O00584 256 aaKnown RBP6.6□□□□□ -1.35
PTCD2-201ENST00000308077 ARHGAP33O14559 1287 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 RFXANKO14593 260 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 SIGLEC6O43699 453 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 DNAJA2O60884 412 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 DNAJB6O75190 326 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 ERN1O75460 977 aaKnown RBP6.6□□□□□ -1.35
PTCD2-201ENST00000308077 PRKRAO75569 313 aaKnown RBP6.6□□□□□ -1.35
PTCD2-201ENST00000308077 C9P02748 559 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 EIF2S1P05198 315 aaKnown RBP6.6□□□□□ -1.35
PTCD2-201ENST00000308077 FAM58BPP0C7Q3 252 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 HSD17B1P14061 328 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 POU3F2P20265 443 aaPredicted RBP6.6□□□□□ -1.35
PTCD2-201ENST00000308077 CSF2RBP32927 897 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 GABRA4P48169 554 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 GSK3BP49841 420 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 HNRNPFP52597 415 aaKnown RBP6.6□□□□□ -1.35
PTCD2-201ENST00000308077 VSX2P58304 361 aaPredicted RBP6.6□□□□□ -1.35
PTCD2-201ENST00000308077 TRA2BP62995 288 aaKnown RBP6.6□□□□□ -1.35
PTCD2-201ENST00000308077 LIPEQ05469 1076 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 SLAMF1Q13291 335 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 SLC14A1Q13336 389 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 TRIM25Q14258 630 aaKnown RBP6.6□□□□□ -1.35
PTCD2-201ENST00000308077 SNCBQ16143 134 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 C6orf163Q5TEZ5 329 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 ZCCHC8Q6NZY4 707 aaKnown RBP6.6□□□□□ -1.35
PTCD2-201ENST00000308077 PRSS41Q7RTY9 318 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 R3HCC1LQ7Z5L2 792 aaKnown RBP6.6□□□□□ -1.35
PTCD2-201ENST00000308077 SHISA5Q8N114 240 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 ZCCHC7Q8N3Z6 543 aaKnown RBP6.6□□□□□ -1.35
PTCD2-201ENST00000308077 ARHGEF39Q8N4T4 335 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 DNAJC22Q8N4W6 341 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 Q8N9G6 341 aaPredicted RBP6.6□□□□□ -1.35
PTCD2-201ENST00000308077 HIPK4Q8NE63 616 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 OR8J3Q8NGG0 315 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 CEP76Q8TAP6 659 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 CCDC74AQ96AQ1 378 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 PPCDCQ96CD2 204 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 ASB9Q96DX5 294 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 MTERF3Q96E29 417 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 CPPED1Q9BRF8 314 aaPredicted RBP6.6□□□□□ -1.35
PTCD2-201ENST00000308077 SLAMF7Q9NQ25 335 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms