RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 ANKRD28O15084 1053 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 PTCHD3Q3KNS1 767 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 MAP4K3Q8IVH8 894 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 RRAGCQ9HB90 399 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 ATG4BQ9Y4P1 393 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 CEP152O94986 1710 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 MYPNQ86TC9 1320 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 IL1AP01583 271 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 TAF10Q12962 218 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 FBXL20Q96IG2 436 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 NR2E3Q9Y5X4 410 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 OR7A17O14581 309 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 FXYD4P59646 89 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 MEP1AQ16819 746 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 CCDC71Q8IV32 467 aaPredicted RBP12.94□□□□□ -0.34
TRIM56-201ENST00000306085 CCDC32Q9BV29 185 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 IRS2Q9Y4H2 1338 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 KLHL33A6NCF5 533 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 GJA5P36382 358 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 LRCH3Q96II8 777 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 ACTR10Q9NZ32 417 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 DPEP1P16444 411 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 MOGQ16653 247 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 TMEM185AQ8NFB2 350 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 OR2A12Q8NGT7 310 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 DUSP9Q99956 384 aaKnown RBP12.94□□□□□ -0.34
TRIM56-201ENST00000306085 MDC1Q14676 2089 aaKnown RBP12.94□□□□□ -0.34
TRIM56-201ENST00000306085 TTLL8A6PVC2 850 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 NFATC1O95644 943 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 SLC6A6P31641 620 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 TRAM1Q15629 374 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 Q8N9G6 341 aaPredicted RBP12.94□□□□□ -0.34
TRIM56-201ENST00000306085 ANKK1Q8NFD2 765 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 OR51G2Q8NGK0 314 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 B3GNT5Q9BYG0 378 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 RHCGQ9UBD6 479 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 FCF1Q9Y324 198 aaKnown RBP12.94□□□□□ -0.34
TRIM56-201ENST00000306085 CSNK2A2P19784 350 aaPredicted RBP12.94□□□□□ -0.34
TRIM56-201ENST00000306085 NSG1P42857 185 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 AWAT2Q6E213 333 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 PHF13Q86YI8 300 aaPredicted RBP12.94□□□□□ -0.34
TRIM56-201ENST00000306085 BEST4Q8NFU0 473 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 HMGB4Q8WW32 186 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 ACO2Q99798 780 aaKnown RBP12.94□□□□□ -0.34
TRIM56-201ENST00000306085 ADARB2Q9NS39 739 aaKnown RBP12.94□□□□□ -0.34
TRIM56-201ENST00000306085 NPFFR2Q9Y5X5 522 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 CHEK1O14757 476 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 CAPN5O15484 640 aaPredicted RBP12.94□□□□□ -0.34
TRIM56-201ENST00000306085 NPHS1O60500 1241 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 PAHP00439 452 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 VIPR1P32241 457 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 ZNF84P51523 738 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 LAPTM4AQ15012 233 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 MYLK3Q32MK0 819 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 BCL2L15Q5TBC7 163 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 TMEM225Q6GV28 225 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 POLDIP3Q9BY77 421 aaKnown RBP12.94□□□□□ -0.34
TRIM56-201ENST00000306085 LIN28AQ9H9Z2 209 aaKnown RBP12.94□□□□□ -0.34
TRIM56-201ENST00000306085 INSIG1O15503 277 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 MAP2K3P46734 347 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 BLKP51451 505 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 MVKQ03426 396 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 LASP1Q14847 261 aaKnown RBP12.94□□□□□ -0.34
TRIM56-201ENST00000306085 MBOAT1Q6ZNC8 495 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 CSPG4P5Q96PW8 444 aa12.94□□□□□ -0.34
TRIM56-201ENST00000306085 ZFP37Q9Y6Q3 630 aaPredicted RBP12.94□□□□□ -0.34
TRIM56-201ENST00000306085 ARPC5O15511 151 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 NAA10P41227 235 aaPredicted RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 RPP30P78346 268 aaKnown RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 MLLT1Q03111 559 aaPredicted RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 EEF1DP3Q658K8 133 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 TANGO2Q6ICL3 276 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 TATDN1Q6P1N9 297 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 GID4Q8IVV7 300 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 ZDHHC12Q96GR4 267 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 RDH12Q96NR8 316 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 PSD2Q9BQI7 771 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 MRI1Q9BV20 369 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 TEX10Q9NXF1 929 aaPredicted RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 NAALAD2Q9Y3Q0 740 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 CFAP20Q9Y6A4 193 aaKnown RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 GLI2P10070 1586 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 PCDH17O14917 1159 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 JUNDP17535 347 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 FOXK1P85037 733 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 FMO1Q01740 532 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 ACY1Q03154 408 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 ITPRIPL2Q3MIP1 535 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 NBPF12Q5TAG4 269 aaPredicted RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 KIAA1614Q5VZ46 1190 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 PRPS1L1P21108 318 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 CD52P31358 61 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 TDGQ13569 410 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 BAIAP2L2Q6UXY1 529 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 LNX1Q8TBB1 728 aaPredicted RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 VPS29Q9UBQ0 182 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 H7C1Q1 480 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 LDB2O43679 373 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 PTPRAP18433 802 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 MAP2K4P45985 399 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms