RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 TMCO5AQ8N6Q1 288 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 TP53I13Q8NBR0 393 aaPredicted RBP6.88□□□□□ -1.31
RGPD3-201ENST00000304514 NEURL3Q96EH8 262 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 FEVQ99581 238 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 NT5DC2Q9H857 520 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 NDOR1Q9UHB4 597 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 MAP4K5Q9Y4K4 846 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 PCDHGA3Q9Y5H0 932 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 LAMA2P24043 3122 aaKnown RBP6.88□□□□□ -1.31
RGPD3-201ENST00000304514 CLCA1A8K7I4 914 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 SEMA7AO75326 666 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 CRISP3P54108 245 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 NCS1P62166 190 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 C2orf80Q0P641 193 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 ZNF234Q14588 700 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 PUM1Q14671 1186 aaKnown RBP eCLIP6.88□□□□□ -1.31
RGPD3-201ENST00000304514 HIST2H2ACQ16777 129 aaPredicted RBP6.88□□□□□ -1.31
RGPD3-201ENST00000304514 FAM78AQ5JUQ0 283 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 HORMAD2Q8N7B1 307 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 ATG16L2Q8NAA4 619 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 OR9Q2Q8NGE9 314 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 CREB3L4Q8TEY5 395 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 OR8D1Q8WZ84 308 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 LGR4Q9BXB1 951 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 MS4A8Q9BY19 250 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 MROQ9BYG7 248 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 ZCCHC2Q9C0B9 1178 aaKnown RBP6.88□□□□□ -1.31
RGPD3-201ENST00000304514 RASSF1Q9NS23 344 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 SLC23A2Q9UGH3 650 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 TMEM98Q9Y2Y6 226 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 XIRP2A4UGR9 3374 aa6.88□□□□□ -1.31
RGPD3-201ENST00000304514 ZAR1LA6NP61 321 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 HMGN4O00479 90 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 CHI3L1P36222 383 aaPredicted RBP6.87□□□□□ -1.31
RGPD3-201ENST00000304514 GPR1P46091 355 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 IL1RL1Q01638 556 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 FNDC3BQ53EP0 1204 aaKnown RBP6.87□□□□□ -1.31
RGPD3-201ENST00000304514 KHDRBS2Q5VWX1 349 aaKnown RBP6.87□□□□□ -1.31
RGPD3-201ENST00000304514 PNCKQ6P2M8 343 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 COMTD1Q86VU5 262 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 ZNF740Q8NDX6 193 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 FCGR1BQ92637 280 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 UCN3Q969E3 161 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 ABTB1Q969K4 478 aaPredicted RBP6.87□□□□□ -1.31
RGPD3-201ENST00000304514 PAWRQ96IZ0 340 aaKnown RBP6.87□□□□□ -1.31
RGPD3-201ENST00000304514 IL17FQ96PD4 163 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 SLC25A19Q9HC21 320 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 TM7SF3Q9NS93 570 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 CCDC59Q9P031 241 aaKnown RBP6.87□□□□□ -1.31
RGPD3-201ENST00000304514 SH3BP4Q9P0V3 963 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 ACAD8Q9UKU7 415 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 LSM2Q9Y333 95 aaKnown RBP6.87□□□□□ -1.31
RGPD3-201ENST00000304514 IGKV1-8A0A0C4DH67 115 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 CACNB4O00305 520 aaPredicted RBP6.87□□□□□ -1.31
RGPD3-201ENST00000304514 GASTP01350 101 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 DDX5P17844 614 aaKnown RBP6.87□□□□□ -1.31
RGPD3-201ENST00000304514 GSTM5P46439 218 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 PSMD7P51665 324 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 AGERQ15109 404 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 SYTL1Q8IYJ3 562 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 S100ZQ8WXG8 99 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 PROX1Q92786 737 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 TEX101Q9BY14 249 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 PITHD1Q9GZP4 211 aaPredicted RBP6.87□□□□□ -1.31
RGPD3-201ENST00000304514 CUEDC1Q9NWM3 386 aaPredicted RBP6.87□□□□□ -1.31
RGPD3-201ENST00000304514 C4orf51C9J302 202 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 BCAP31P51572 246 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 CDH12P55289 794 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 CDK6Q00534 326 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 HIST2H2AA3Q6FI13 130 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 GPR153Q6NV75 609 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 AHSA2Q719I0 299 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 ADGRD2Q7Z7M1 963 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 ZBTB46Q86UZ6 589 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 TRAPPC5Q8IUR0 188 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 GPR32P1Q8NGA4 272 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 OR4D11Q8NGI4 311 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 FGF11Q92914 225 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 WFDC6Q9BQY6 131 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 CCDC90BQ9GZT6 254 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 GPR83Q9NYM4 423 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 WARS2Q9UGM6 360 aaKnown RBP6.87□□□□□ -1.31
RGPD3-201ENST00000304514 PRAMEF27A3QJZ7 478 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 LINC01553A4QN01 128 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 POP7O75817 140 aaKnown RBP6.87□□□□□ -1.31
RGPD3-201ENST00000304514 SEMA3DO95025 777 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 OCM2P0CE71 109 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 OCMP0CE72 109 aaPredicted RBP6.87□□□□□ -1.31
RGPD3-201ENST00000304514 ADORA3P0DMS8 318 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 PIPP12273 146 aaPredicted RBP6.87□□□□□ -1.31
RGPD3-201ENST00000304514 ITGA2P17301 1181 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 RHCEP18577 417 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 XPAP23025 273 aaPredicted RBP6.87□□□□□ -1.31
RGPD3-201ENST00000304514 DSTNP60981 165 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 CDK3Q00526 305 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 STARD3Q14849 445 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 SEC23BQ15437 767 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 DGUOKQ16854 277 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 RGS21Q2M5E4 152 aa6.87□□□□□ -1.31
RGPD3-201ENST00000304514 AGBL4Q5VU57 503 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms